HHsearch alignment for GI: 254780516 and conserved domain: pfam05175
>pfam05175 MTS Methyltransferase small domain. This domain is found in ribosomal RNA small subunit methyltransferase C as well as other methyltransferases .
Probab=96.62 E-value=0.0072 Score=34.83 Aligned_cols=67 Identities=21% Similarity=0.379 Sum_probs=48.2
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCC------CCCCEEEEEECCCC--CCCEEEEECC
Q ss_conf 696410794788999987222089569999806955511222001233------23211589753657--8871999868
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT------LIFGDIAKIKTQDI--PDHDVLLAGF 74 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~------~~~~DI~~~~~~~~--~~~D~l~gG~ 74 (83)
T Consensus 34 ~vLDlGcG~G~i~~~la~~~p--~-~~v~~vDi~~~Al~~a~~N~~~n~l~~v~v~~~D~~~----~~~~~~fD~IvsNP 106 (170)
T pfam05175 34 KVLDLGCGYGVLGAALAKRSP--D-LEVTMVDINARALESARANLAANGLENGEVFWSDLYS----AVEPGKFDLIISNP 106 (170)
T ss_pred CEEEECCCCCHHHHHHHHHCC--C-CEEEECHHHHHHHHHHHHHHHHHCCCEEEEEECCCCC----CCCCCCEEEEEECC
T ss_conf 499977648298999999789--8-6798515449999999999998099848999744666----57788660899897
Q ss_pred CC
Q ss_conf 99
Q gi|254780516|r 75 PC 76 (83)
Q Consensus 75 PC 76 (83)
T Consensus 107 P~ 108 (170)
T pfam05175 107 PF 108 (170)
T ss_pred CC
T ss_conf 72