HHsearch results for GI: 254780516 and protein with PDBid: 2pv0_B
>2pv0_B DNA (cytosine-5)-methyltransferase 3-like; DNMT3L, unmethylated H3K4, de novo DNA methylation, transferase regulator; HET: DNA; 3.30A {Homo sapiens} PDB: 2pvc_B*
Probab=99.54 E-value=2.8e-16 Score=101.03 Aligned_cols=62 Identities=16% Similarity=0.173 Sum_probs=48.8
Q ss_pred CEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCCCCCEEEEEE---CCCCCCCEEEEECCCCCC
Q ss_conf 26964107947889999872220895699998069555112220012332321158975---365788719998689975
Q gi|254780516|r 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLIFGDIAKIK---TQDIPDHDVLLAGFPCQP 78 (83)
Q Consensus 2 l~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~~~~DI~~~~---~~~~~~~D~l~gG~PCq~ 78 (83)
|||||||+|||+..++|+. ++.|+|+.+.+ +++||+++. .++++++|+|+||||||+
T Consensus 190 ~rVlsLFdgi~~g~~~l~~----------~~~~~~~~~i~----------~~gDV~~i~~~~i~e~g~~DlliGG~PCq~ 249 (386)
T 2pv0_B 190 VRVLSLFEDIKKELTSLGF----------LESGSDPGQLK----------HVVDVTDTVRKDVEEWGPFDLVYGATPPLG 249 (386)
T ss_dssp CCEEEESSCCHHHHHHTTS----------SCSSCCSCSEE----------EESCCTTCCHHHHHHSCCCSEEEEECCCTT
T ss_pred CEEEEEECCCCCHHHHHHH----------HHHCCCCCCEE----------ECHHHHHHHHHHHHHCCCCCEEEECCCCCC
T ss_conf 5799853475420334345----------55204755212----------606545301432423577674774799866
Q ss_pred CCCCC
Q ss_conf 43689
Q gi|254780516|r 79 FSQAG 83 (83)
Q Consensus 79 fS~aG 83 (83)
||+++
T Consensus 250 fS~~d 254 (386)
T 2pv0_B 250 HTCDR 254 (386)
T ss_dssp TCSCS
T ss_pred CCCCC
T ss_conf 64558