HHsearch results for GI: 254780516 and protein with PDBid: 3mb5_A
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=90.98 E-value=0.71 Score=23.72 Aligned_cols=71 Identities=20% Similarity=0.103 Sum_probs=46.3
Q ss_pred CEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCC-------CCCCEEEEEECCCCCCCEEEEECC
Q ss_conf 2696410794788999987222089569999806955511222001233-------232115897536578871999868
Q gi|254780516|r 2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT-------LIFGDIAKIKTQDIPDHDVLLAGF 74 (83)
Q Consensus 2 l~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~-------~~~~DI~~~~~~~~~~~D~l~gG~ 74 (83)
.||+|+-+|-|++++.|-++.... -.|.++|+++...+.-+.|+... ...+|+..-.. -..+|.++.-.
T Consensus 95 ~rVLd~G~GsG~lt~~lar~~~~~--G~V~~~D~~~~~~~~A~~n~~~~gl~~~v~~~~~D~~~~~~--~~~~D~V~ld~ 170 (255)
T 3mb5_A 95 DFIVEAGVGSGALTLFLANIVGPE--GRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEGIE--EENVDHVILDL 170 (255)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTT--SEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGCCC--CCSEEEEEECS
T ss_pred CEEEECCCCCHHHHHHHHHHCCCC--CEEEEECCCHHHHHHHHHHHHHCCCCEEEEEEECCHHCCCC--CCCCCEEEEEC
T ss_conf 989988866279999999743889--77998349999999999999971998149999461103555--56565799966
Q ss_pred CC
Q ss_conf 99
Q gi|254780516|r 75 PC 76 (83)
Q Consensus 75 PC 76 (83)
|-
T Consensus 171 p~ 172 (255)
T 3mb5_A 171 PQ 172 (255)
T ss_dssp SC
T ss_pred CC
T ss_conf 85