HHSEARCH alignment of GI: 254780516 and SCOP domain: d1dusa_

Alignment
>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=96.74  E-value=0.0025  Score=34.87  Aligned_cols=70  Identities=21%  Similarity=0.302  Sum_probs=47.0

Q ss_pred             CEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCCC-CCEEEEEECC---CC--CCCEEEEECCC
Q ss_conf             269641079478899998722208956999980695551122200123323-2115897536---57--88719998689
Q gi|254780516|r    2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-FGDIAKIKTQ---DI--PDHDVLLAGFP   75 (83)
Q Consensus         2 l~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~~-~~DI~~~~~~---~~--~~~D~l~gG~P   75 (83)
                      -+|+|++||.|.+.+.+...+     ..|.++|+++.+.+.-+.|...... ..+++-+..+   .+  ..+|+++.-+|
T Consensus        54 ~~VLDiGcG~G~~~~~la~~~-----~~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~d~~~~~~~~~fD~Ii~~~p  128 (194)
T d1dusa_          54 DDILDLGCGYGVIGIALADEV-----KSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVKDRKYNKIITNPP  128 (194)
T ss_dssp             CEEEEETCTTSHHHHHHGGGS-----SEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTCTTSCEEEEEECCC
T ss_pred             CEEEEEEECCCHHHHHHHHHC-----CCCCEEEECCCCCHHHHHHHHHHCCCCCEEEEEECCHHHHHCCCCCEEEEECCC
T ss_conf             829999511786278887510-----134113100010016777788737765228999712455313677529998664


Q ss_pred             C
Q ss_conf             9
Q gi|254780516|r   76 C   76 (83)
Q Consensus        76 C   76 (83)
                      .
T Consensus       129 ~  129 (194)
T d1dusa_         129 I  129 (194)
T ss_dssp             S
T ss_pred             E
T ss_conf             7


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein MJ0882
domain: Hypothetical protein MJ0882
species: Archaeon Methanococcus jannaschii [TaxId: 2190]