HHSEARCH alignment of GI: 254780516 and SCOP domain: d1g8aa_

Alignment

Probab=94.45  E-value=0.035  Score=29.10  Aligned_cols=75  Identities=16%  Similarity=0.201  Sum_probs=49.8

Q ss_pred             CEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCC----CCCCEEEEEEC--CCCCCCEEEEECCC
Q ss_conf             2696410794788999987222089569999806955511222001233----23211589753--65788719998689
Q gi|254780516|r    2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNT----LIFGDIAKIKT--QDIPDHDVLLAGFP   75 (83)
Q Consensus         2 l~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~----~~~~DI~~~~~--~~~~~~D~l~gG~P   75 (83)
                      .||+||-||.|.+..-+.+.....  -.|+++|+++.+.+..+.+....    ++..|.+....  ...+.+|+++...|
T Consensus        75 ~~VLDlGaGsG~~t~~la~~VG~~--G~V~aVD~s~~~l~~a~~~a~~~~~~~~i~~d~~~~~~~~~~~~~vD~i~~d~~  152 (227)
T d1g8aa_          75 KSVLYLGIASGTTASHVSDIVGWE--GKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVDVIFEDVA  152 (227)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHCTT--SEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEEEEEECCC
T ss_pred             CEEEEECCCCCHHHHHHHHHHCCC--CEEEEEECCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCEEEEEEECC
T ss_conf             889991557789999999984999--789999475999999999997468833899777774201344465679999712


Q ss_pred             CCC
Q ss_conf             975
Q gi|254780516|r   76 CQP   78 (83)
Q Consensus        76 Cq~   78 (83)
                      |.+
T Consensus       153 ~~~  155 (227)
T d1g8aa_         153 QPT  155 (227)
T ss_dssp             STT
T ss_pred             CCC
T ss_conf             441

SCOP domain information

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]