HHSEARCH alignment of GI: 254780516 and SCOP domain: d1p91a_

Alignment

Probab=90.72  E-value=0.14  Score=26.04  Aligned_cols=67  Identities=13%  Similarity=0.326  Sum_probs=47.4

Q ss_pred             CEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCC-CCCEEEEEECCCCCCCEEEEE
Q ss_conf             26964107947889999872220895699998069555112220012332-321158975365788719998
Q gi|254780516|r    2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL-IFGDIAKIKTQDIPDHDVLLA   72 (83)
Q Consensus         2 l~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~-~~~DI~~~~~~~~~~~D~l~g   72 (83)
                      .+|+|+=||-|.+...+...+.  +. .+..+|+++.+.+.-+.+.++.. ..+|+.++...+ ..+|+++.
T Consensus        86 ~~iLDiGcG~G~~~~~l~~~~~--~~-~~~giD~s~~~~~~a~~~~~~~~~~~~d~~~l~~~~-~sfD~v~~  153 (268)
T d1p91a_          86 TAVLDIGCGEGYYTHAFADALP--EI-TTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLPFSD-TSMDAIIR  153 (268)
T ss_dssp             CEEEEETCTTSTTHHHHHHTCT--TS-EEEEEESCHHHHHHHHHHCTTSEEEECCTTSCSBCT-TCEEEEEE
T ss_pred             CEEEEECCCCCHHHHHHHHHCC--CC-EEEEECCHHHHHHHHHCCCCCCCCEEEEHHHCCCCC-CCEEEEEE
T ss_conf             8799957989688899998789--97-899966167655554202135320011012135789-98888852

SCOP domain information

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: rRNA methyltransferase RlmA
domain: rRNA methyltransferase RlmA
species: Escherichia coli [TaxId: 562]