HHSEARCH alignment of GI: 254780516 and SCOP domain: d1yb2a1

Alignment

Probab=94.41  E-value=0.1  Score=26.75  Aligned_cols=72  Identities=18%  Similarity=0.199  Sum_probs=48.1

Q ss_pred             CEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCCC-------CCEEEEEECCCCCCCEEEEECC
Q ss_conf             269641079478899998722208956999980695551122200123323-------2115897536578871999868
Q gi|254780516|r    2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTLI-------FGDIAKIKTQDIPDHDVLLAGF   74 (83)
Q Consensus         2 l~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~~-------~~DI~~~~~~~~~~~D~l~gG~   74 (83)
                      .||+|.-+|-|.++..+.++....  -.|.++|+++...+.-+.|+.....       .+|+.+.-.+  ..+|.++-..
T Consensus        87 ~rVLEiG~GsG~lt~~la~~v~~~--g~V~~vD~~e~~~~~A~~n~~~~~~~~nv~~~~~Di~~~~~~--~~fD~V~ld~  162 (250)
T d1yb2a1          87 MDILEVGVGSGNMSSYILYALNGK--GTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADFISD--QMYDAVIADI  162 (250)
T ss_dssp             CEEEEECCTTSHHHHHHHHHHTTS--SEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTCCCS--CCEEEEEECC
T ss_pred             CEEEEEEEECCHHHHHHHHHHCCC--CEEEEEECCHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCC--CEEEEEEECC
T ss_conf             978992222749999999970999--589999798999999999999850898168997002012344--2254356637


Q ss_pred             CCC
Q ss_conf             997
Q gi|254780516|r   75 PCQ   77 (83)
Q Consensus        75 PCq   77 (83)
                      |..
T Consensus       163 p~p  165 (250)
T d1yb2a1         163 PDP  165 (250)
T ss_dssp             SCG
T ss_pred             CCH
T ss_conf             756

SCOP domain information

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein Ta0852
species: Thermoplasma acidophilum [TaxId: 2303]