HHSEARCH alignment of GI: 254780516 and SCOP domain: d2dula1

Alignment

>d2dula1 c.66.1.58 (A:3-377) N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1 {Pyrococcus horikoshii [TaxId: 53953]}

Probab=95.99  E-value=0.0043  Score=33.67  Aligned_cols=44  Identities=11%  Similarity=0.070  Sum_probs=34.5

Q ss_pred             CEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCC
Q ss_conf             26964107947889999872220895699998069555112220012
Q gi|254780516|r    2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP   48 (83)
Q Consensus         2 l~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~   48 (83)
                      .+++|+|||.|+.++  +.+ .+.+.+.|+++|+++.|.+..++|..
T Consensus        47 ~~vLD~~sasG~rsi--Rya-~E~~~~~V~~nDis~~A~~~i~~N~~   90 (375)
T d2dula1          47 KIVLDALSATGIRGI--RFA-LETPAEEVWLNDISEDAYELMKRNVM   90 (375)
T ss_dssp             SEEEESSCTTSHHHH--HHH-HHSSCSEEEEEESCHHHHHHHHHHHH
T ss_pred             CEEEECCCCCCHHHH--HHH-HHCCCCEEEEECCCHHHHHHHHHHHH
T ss_conf             879986877409999--999-85899789982599899999999998

SCOP domain information

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TRM1-like
domain: N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1
species: Pyrococcus horikoshii [TaxId: 53953]