HHsearch alignment for GI: 254780519 and conserved domain: PRK12780
>PRK12780 fliR flagellar biosynthesis protein FliR; Reviewed.
Probab=94.06 E-value=0.37 Score=25.08 Aligned_cols=78 Identities=10% Similarity=0.104 Sum_probs=69.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999-9998846536988999999999999999999999999999999
Q gi|254780519|r 4 ADVLEIARAAMWTILSSSAPVLFSAMFLGILIAFL-QALTQIQEVTLTFVPKIIAVFITLIISAPFIGGQISSFVTLVL 81 (88)
Q Consensus 4 ~~vi~l~~~al~~~l~ls~P~Ll~alvvGl~Isi~-QA~TQIQEqTLsFvPKliav~~~l~~~~pwm~~~l~~f~~~if 81 (88)
T Consensus 170 ~~~~~~~~~~F~lal~lAaPvi~~~ll~nv~lGil~R~~PQlNvf~vg~P~~i~~Gl~vL~l~~p~l~~~f~~~f~~~~ 248 (250)
T PRK12780 170 VQLVDQLSEAFTLALRIASPFIIYSVIVNLAVGLANKLTPTIPVYFISTPFVLFGGLLLLYLLSDEMLTQFSLAYAAWL 248 (250)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999999999999999999998033555899995699999999999999999999999999997