RPS-BLAST 2.2.22 [Sep-27-2009]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= gi|254780519|ref|YP_003064932.1| flagellar biosynthesis protein
FliQ [Candidatus Liberibacter asiaticus str. psy62]
         (88 letters)



>d1lbva_ e.7.1.1 (A:) Archaeal inositol
          monophosphatase/fructose-1,6-bisphosphatase {Archaeon
          Archaeoglobus fulgidus [TaxId: 2234]}
          Length = 252

 Score = 23.5 bits (49), Expect = 5.4
 Identities = 7/35 (20%), Positives = 14/35 (40%)

Query: 1  MNEADVLEIARAAMWTILSSSAPVLFSAMFLGILI 35
          M+E D L I+R     +  + A +        + +
Sbjct: 1  MDERDALRISREIAGEVRKAIASMPLRERVKDVGM 35


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.330    0.139    0.373 

Gapped
Lambda     K      H
   0.267   0.0522    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 278,417
Number of extensions: 9736
Number of successful extensions: 37
Number of sequences better than 10.0: 1
Number of HSP's gapped: 37
Number of HSP's successfully gapped: 14
Length of query: 88
Length of database: 2,407,596
Length adjustment: 53
Effective length of query: 35
Effective length of database: 1,679,906
Effective search space: 58796710
Effective search space used: 58796710
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 47 (22.4 bits)