HHsearch alignment for GI: 254780520 and conserved domain: PRK09619

>PRK09619 flgD flagellar basal body rod modification protein; Reviewed.
Probab=99.96  E-value=3.1e-29  Score=188.49  Aligned_cols=78  Identities=23%  Similarity=0.397  Sum_probs=69.7

Q ss_pred             CCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHCCCEEECCCC
Q ss_conf             7333388999999999832998999889789999999999999999999999999---9999976455322614663897
Q gi|254780520|r   19 SKKTLGQDAFLKLLITQIKHQDPTEPMKASEQVAQLAVFSQMEQSVQMNSTLQEL---LKSNNLAQASSYIGKNITNADG   95 (131)
Q Consensus        19 ~~~~l~~d~FLkLL~aQL~nQDP~~P~d~~e~isQlAqfs~leq~~~~~~~l~~~---~~~~~~~~a~sliGk~V~~~~~   95 (131)
T Consensus        26 ~g~~~~qddFL~LL~aQLqNQDPl~PmDn~ef~aQLAQFStvE~i~~ln~~l~~l~~~~~s~q~lqaaslVGk~V~v~g~  105 (220)
T PRK09619         26 PGAEQLNNQFMTLLVAQIQNQDPLNPADGTEFVSQLAQLSQVQSTENMAKLMKSNTVLMDNMQTLATANLVGQQVMVESH  105 (220)
T ss_pred             CCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCC
T ss_conf             74146799999999999852899998877899999998988999999999999999998878999999754987996476


Q ss_pred             E
Q ss_conf             1
Q gi|254780520|r   96 S   96 (131)
Q Consensus        96 ~   96 (131)
T Consensus       106 ~  106 (220)
T PRK09619        106 E  106 (220)
T ss_pred             E
T ss_conf             3