RPSBLAST alignment for GI: 254780520 and conserved domain: COG1843

>gnl|CDD|32028 COG1843, FlgD, Flagellar hook capping protein [Cell motility and secretion]. Length = 222

 Score = 81.2 bits (200), Expect = 8e-17
 Identities = 48/132 (36%), Positives = 69/132 (52%), Gaps = 3/132 (2%)

Query: 3   INTEVNPTQQEFSKSKSKKTLGQDAFLKLLITQIKHQDPTEPMKASEQVAQLAVFSQMEQ 62
            +     T  +   + S  +LG+D FLKLLI Q+K+QDPT PM  +E ++QLA FSQ+EQ
Sbjct: 9   TSASTITTNSKTDSTSSNASLGKDDFLKLLIAQLKNQDPTNPMDNTEFISQLAQFSQVEQ 68

Query: 63  SVQMNSTLQELLKSNN---LAQASSYIGKNITNADGSISGVVNAIQVSSTGLTAITVDNT 119
              MN+TL+ L          QAS+ IGK +  ADG ++ V   ++   T   A      
Sbjct: 69  MENMNTTLESLSSQMTSSQTLQASNLIGKTVMVADGKVTLVDGTVKFVVTLPQAANNVGI 128

Query: 120 EIPITTGIRISN 131
           EI    G+ +  
Sbjct: 129 EITDGNGVVVRT 140