HHsearch alignment for GI: 254780521 and conserved domain: PRK00794

>PRK00794 flbT flagellar biosynthesis repressor FlbT; Reviewed.
Probab=100.00  E-value=0  Score=335.16  Aligned_cols=132  Identities=42%  Similarity=0.650  Sum_probs=129.4

Q ss_pred             CCCEEEEECCCCEEEEEEEEEEECCEEEEEEECCCCEEEHHHCCCHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
Q ss_conf             98658998789889981026741884899997265223157507977704658999999999995767968899999999
Q gi|254780521|r    2 NSPLRISLKAGERIFLNGAVVRVNNKVILELLNDITFILEHHVIREEEAITPFHQLYLIVQMIFLVPTKKDYLIDLGRRY   81 (153)
Q Consensus         2 ~s~Lkl~LKpgERi~INGAVi~~drr~~l~i~n~a~iLre~dil~~eeA~TP~rrlYf~vQ~mll~p~~~~~~~~~~~~~   81 (153)
T Consensus         1 ~~gLkl~LKpgERi~INGAVi~ndrr~~l~i~n~a~iLre~dil~~eeA~TP~rrlYf~vQ~m~l~p~~~~~~~~~~~~~   80 (133)
T PRK00794          1 KSGLVLSLKPGERIFINGAVLRNDRKVRLELLNDATFLLERHVLQPEEATTPLRQLYFAAQLMLIGPADADDARAQFARR   80 (133)
T ss_pred             CCCEEEEECCCCEEEECCEEEECCCEEEEEEEECCCCHHHHHCCCHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
T ss_conf             99627985699889984849982880589997067010123048966568879999999999984877758999999999


Q ss_pred             HHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf             9999831399899999999999986892899999997488999997336898
Q gi|254780521|r   82 INILFNIIQNQQLILALKNIESLINSGRFFEALKNIRTLSFIDNIDPNGSAI  133 (153)
Q Consensus        82 i~~l~~a~~~~~~~~~L~~~~~~V~~g~~Y~ALK~lR~Li~~E~~ll~~~~~  133 (153)
T Consensus        81 ~~~l~~~~~~~~~~~~l~~i~~~v~~g~~Y~ALK~~R~L~~~E~~lL~~~~~  132 (133)
T PRK00794         81 LEGLLAVFKDPDILAGLKAIDELVEAGRYYEALKAIRALYPIEAEILAAVPA  132 (133)
T ss_pred             HHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf             9999998689999999999999997788999999998789999999744899