HHsearch alignment for GI: 254780521 and conserved domain: PRK12791

>PRK12791 flbT flagellar biosynthesis repressor FlbT; Reviewed.
Probab=100.00  E-value=1.1e-33  Score=247.08  Aligned_cols=112  Identities=20%  Similarity=0.257  Sum_probs=104.8

Q ss_pred             EEE-ECCEEEEEEECCCCEEEHHHCCCHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
Q ss_conf             674-1884899997265223157507977704658999999999995767968899999999999983139989999999
Q gi|254780521|r   21 VVR-VNNKVILELLNDITFILEHHVIREEEAITPFHQLYLIVQMIFLVPTKKDYLIDLGRRYINILFNIIQNQQLILALK   99 (153)
Q Consensus        21 Vi~-~drr~~l~i~n~a~iLre~dil~~eeA~TP~rrlYf~vQ~mll~p~~~~~~~~~~~~~i~~l~~a~~~~~~~~~L~   99 (153)
T Consensus         1 Vi~Ngdrrs~l~i~n~a~iLRekDil~~eeA~TP~rrvYf~vQ~myl~~d-~~~~~~~~~~~~~~l~~~~--p~~~~~l~   77 (113)
T PRK12791          1 VITNSDTRARFLIDGDAPILREKDILTAETADTPAKRVYLCVQLMYLSND-IPAYHGTYLGLIRELIEAV--PSAWPIIE   77 (113)
T ss_pred             CEECCCCCEEEEEECCCHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHHHHHC--CHHHHHHH
T ss_conf             94278875268973797035542027965469869999999999982886-0778999999999999869--24799999


Q ss_pred             HHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf             999998689289999999748899999733689885
Q gi|254780521|r  100 NIESLINSGRFFEALKNIRTLSFIDNIDPNGSAIFA  135 (153)
Q Consensus       100 ~~~~~V~~g~~Y~ALK~lR~Li~~E~~ll~~~~~~p  135 (153)
T Consensus        78 ~i~~~V~~g~~Y~ALK~~R~Li~~E~~lL~~~~~~p  113 (113)
T PRK12791         78 AINNHILNGDLYKALKELRKLIAREEKLLARAEATP  113 (113)
T ss_pred             HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf             999999686199999999877899999983588998