HHsearch results for GI: 254780522 and protein with PDBid: 1vh6_A

>1vh6_A Flagellar protein FLIS; structural genomics, unknown function; HET: MSE; 2.50A {Bacillus subtilis} SCOP: a.24.19.1
Probab=95.65  E-value=0.11  Score=28.81  Aligned_cols=105  Identities=9%  Similarity=0.145  Sum_probs=82.8

Q ss_pred             HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC--CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
Q ss_conf             2699999972237979999999999999999998368--88399999999999999999999609889989899999999
Q gi|254780522|r    2 RQYYHETIQESSIECRKREHWILDRSISLLSIAHKSL--PNSKQAVEALFYTSRVWVVFIQDLVSEDNHLPQEVKLNLIS   79 (114)
Q Consensus         2 r~~Y~~~~~~s~~~~R~~E~~~l~~~~~~L~~A~~~~--~~~~~~~eAL~~N~rLWt~~~~dl~~~~N~LP~~LRa~Lis   79 (114)
                      +++|.++.-. +.+|-+.=-.+|..+...|..|....  .+..+..+++..-+.+-.-+..+|-. +    .++-.+|.+
T Consensus         9 ~~aY~~~~v~-tasp~~Li~mLyd~ai~~l~~a~~ai~~~d~~~~~~~l~ka~~Ii~eL~~~Ld~-~----geiA~nL~~   82 (145)
T 1vh6_A            9 YTAYQQNSVN-TATPGELTLMLYNGCLKFIRLAAQAIENDDMERKNENLIKAQNIIQELNFTLNR-N----IELSASMGA   82 (145)
T ss_dssp             ------------CCTTHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHH-H----HHHTTHHHH
T ss_pred             HHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCC-C----HHHHHHHHH
T ss_conf             9999986050-599999999999999999999999998579999999999999999998753226-8----189999999


Q ss_pred             HHHHHHHHH-HHHHCCCCCCHHHHHHHHHHHHHH
Q ss_conf             999999999-999547843127999999999951
Q gi|254780522|r   80 IGLWVLKEC-ERIRRNKSNSYQDIIDVISIVRDG  112 (114)
Q Consensus        80 L~~fv~~~t-~~v~~~~~~~l~~LI~IN~~I~~G  112 (114)
                      |-.|+.++. ...+..+.+.++..+.|=..|++|
T Consensus        83 lY~y~~~~L~~a~~~~d~~~l~~v~~il~~l~ea  116 (145)
T 1vh6_A           83 MYDYMYRRLVQANIKNDTGMLAEVEGYVTDFRDA  116 (145)
T ss_dssp             HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_conf             9999999999998758999999999999999999