HHsearch results for GI: 254780522 and protein with PDBid: 1vh6_A
>1vh6_A Flagellar protein FLIS; structural genomics, unknown function; HET: MSE; 2.50A {Bacillus subtilis} SCOP: a.24.19.1
Probab=95.65 E-value=0.11 Score=28.81 Aligned_cols=105 Identities=9% Similarity=0.145 Sum_probs=82.8
Q ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC--CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
Q ss_conf 2699999972237979999999999999999998368--88399999999999999999999609889989899999999
Q gi|254780522|r 2 RQYYHETIQESSIECRKREHWILDRSISLLSIAHKSL--PNSKQAVEALFYTSRVWVVFIQDLVSEDNHLPQEVKLNLIS 79 (114)
Q Consensus 2 r~~Y~~~~~~s~~~~R~~E~~~l~~~~~~L~~A~~~~--~~~~~~~eAL~~N~rLWt~~~~dl~~~~N~LP~~LRa~Lis 79 (114)
+++|.++.-. +.+|-+.=-.+|..+...|..|.... .+..+..+++..-+.+-.-+..+|-. + .++-.+|.+
T Consensus 9 ~~aY~~~~v~-tasp~~Li~mLyd~ai~~l~~a~~ai~~~d~~~~~~~l~ka~~Ii~eL~~~Ld~-~----geiA~nL~~ 82 (145)
T 1vh6_A 9 YTAYQQNSVN-TATPGELTLMLYNGCLKFIRLAAQAIENDDMERKNENLIKAQNIIQELNFTLNR-N----IELSASMGA 82 (145)
T ss_dssp ------------CCTTHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHH-H----HHHTTHHHH
T ss_pred HHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCC-C----HHHHHHHHH
T ss_conf 9999986050-599999999999999999999999998579999999999999999998753226-8----189999999
Q ss_pred HHHHHHHHH-HHHHCCCCCCHHHHHHHHHHHHHH
Q ss_conf 999999999-999547843127999999999951
Q gi|254780522|r 80 IGLWVLKEC-ERIRRNKSNSYQDIIDVISIVRDG 112 (114)
Q Consensus 80 L~~fv~~~t-~~v~~~~~~~l~~LI~IN~~I~~G 112 (114)
|-.|+.++. ...+..+.+.++..+.|=..|++|
T Consensus 83 lY~y~~~~L~~a~~~~d~~~l~~v~~il~~l~ea 116 (145)
T 1vh6_A 83 MYDYMYRRLVQANIKNDTGMLAEVEGYVTDFRDA 116 (145)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_conf 9999999999998758999999999999999999