HHsearch alignment for GI: 254780523 and conserved domain: PRK06008
>PRK06008 flgL flagellar hook-associated protein FlgL; Validated.
Probab=100.00 E-value=0 Score=366.76 Aligned_cols=348 Identities=31% Similarity=0.467 Sum_probs=318.4
Q ss_pred CCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 97613218999999999999999999999999720220464212899999999999999999999999999999999999
Q gi|254780523|r 1 MKTTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQ 80 (357)
Q Consensus 1 m~~~~Ist~~~~~~~~~~l~~~~~~l~~~~~qlsTGk~i~~~sddp~~~~~~~~l~~~~~~l~~~~~n~~~a~~~l~~~e 80 (357)
T Consensus 1 m~~~~Ist~~~~~~lr~~~~~~q~~l~~~~~E~sTG~~ad~~~~lg~~~~~~~~l~~~~~~~~~~~~~~~~~~~rl~~~q 80 (348)
T PRK06008 1 MKTSFISTYALQNALRLTIAKLQAELVKAQTEATTGRYADVGLSLGSKTGRSVSLRREYDRLASLTDSNSLVTQRLTATQ 80 (348)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 97500128999999999999999999999998713710565431126689999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 98888999999999999851378889889999999998656777777652002430410566544321223333322222
Q gi|254780523|r 81 AHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKK 160 (357)
Q Consensus 81 ~~L~~i~~~l~~~~~~~v~a~n~t~~~~d~~~~a~e~~~~~~~l~~~aN~~~~g~~~f~G~~~~~~p~~~~~~~~~~~~~ 160 (357)
T Consensus 81 ~aL~~i~~~~~~~~~~l~~~~~~~~~---~~~~~~~a~~~l~~lv~~lNt~~~G~yLFaG~~tdt~P~~d~~~~~s~~~~ 157 (348)
T PRK06008 81 TALGQLIDAAQSFLNDLLAANASAET---GSVVAQSARSALSSLTSTLNTSVNGEYLFAGINTDVKPLTDYTAPGSAAKT 157 (348)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCC---HHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCHH
T ss_conf 99999999999999999824688860---889999999999999998726538852226867898875334567652024
Q ss_pred CCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEECCCCCCEEEEEECCC
Q ss_conf 22100010134543222456653211233322100123344444566543200111566520000025641022320353
Q gi|254780523|r 161 SFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDVSANVNM 240 (357)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (357)
T Consensus 158 ~~d~~~~~~~~------~~~~~~~~a~it~~~~~~~~~~~~~~~f~~~~~~~~~s~as~~~~~~~I~~~~~v~~s~~An~ 231 (348)
T PRK06008 158 AVDTAFQTFFG------FAQDDPAVSNITAAQMQTFLDGTFAPLFNDANWSANWSSASDTNITSRISPTETAETSTSANA 231 (348)
T ss_pred HHHHHHHHHHC------CCCCCCCHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEECCCCCCC
T ss_conf 47777765403------677762043200566643304642113467630114355777652101378863303667886
Q ss_pred CHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 10112333332100233445551135667777789999999999999998668999999999989999999998643332
Q gi|254780523|r 241 RGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQNKNNIIDTYISKSI 320 (357)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~i~~~~a~lGa~~~~l~~~~~~l~~~~~~l~~~~s~l~ 320 (357)
T Consensus 232 ~~~r~~~~~~~~~a~~~~~~l~~~a~~~~~~~a~~~l~~a~~~l~~~ra~lG~~q~rie~a~~r~~~~~~~l~~~~s~le 311 (348)
T PRK06008 232 EGFRKLAMAYVMVSELGDIGLSSEAQQTVTDKAITLTGQAITGLTTQQATLGLAQSRVKKANTRLDAQIKLLKGQILDLE 311 (348)
T ss_pred HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 88999999999985025788986789999999999999999999999998659999999999989999999999987421
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCC
Q ss_conf 7888999999999999999999999997368505209
Q gi|254780523|r 321 GVEQHTAHAQLSTLINKIEMSYMITTKLQKLSILNYL 357 (357)
Q Consensus 321 daD~ae~~t~l~~~q~~~qas~~~~a~i~~~SL~dyL 357 (357)
T Consensus 312 ~vD~~Ea~t~l~~~q~qLeasy~~tarl~~LSL~nyL 348 (348)
T PRK06008 312 GVDPYEASTRVNALQTQIETSYSLTSQLQQLSLVNYL 348 (348)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHC
T ss_conf 7689999999999999999999999998513297419