HHsearch alignment for GI: 254780523 and conserved domain: PRK06819
>PRK06819 flagellin; Validated.
Probab=100.00 E-value=0 Score=315.13 Aligned_cols=347 Identities=10% Similarity=0.013 Sum_probs=225.5
Q ss_pred CCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 61321899999999999999999999999972022046421289999999999999999999999999999999999998
Q gi|254780523|r 3 TTGISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAERLHSNSLVTKRLSTSQAH 82 (357)
Q Consensus 3 ~~~Ist~~~~~~~~~~l~~~~~~l~~~~~qlsTGk~i~~~sddp~~~~~~~~l~~~~~~l~~~~~n~~~a~~~l~~~e~~ 82 (357)
T Consensus 1 m~~IntN~~A~~a~~~L~~~~~~l~ks~~rLSSG~rIn~asDDaAg~aia~~~~~~i~~l~q~~~N~~~~~s~lqtae~a 80 (371)
T PRK06819 1 MAVINTNSLSLLTQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQAARNANDGISIAQTTEGA 80 (371)
T ss_pred CCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 98686369999999999999999999999852216637710148899999999999988999999899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCEEECCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 8889999999999998513788898899999999986567777776520-024304105665443212233333222222
Q gi|254780523|r 83 LSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANMT-DEGQYLFSGINSSEKPLNGYFTKDSLAKKS 161 (357)
Q Consensus 83 L~~i~~~l~~~~~~~v~a~n~t~~~~d~~~~a~e~~~~~~~l~~~aN~~-~~g~~~f~G~~~~~~p~~~~~~~~~~~~~~ 161 (357)
T Consensus 81 L~~i~~iLqRmRELavqAaNgt~s~~DR~~i~~Ei~ql~~ei~~ia~~t~fnG~~ll~g~~~~~~qvg~~~~~-~i~-i~ 158 (371)
T PRK06819 81 LNEINNNLQRVRELTVQAQNGSNSASDLDSIQDEINQRLAEIDRVSDQTDFNGVKVLAENTTMSIQVGANDGE-TID-IN 158 (371)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCEEEEECCCCCC-EEE-EE
T ss_conf 9999999999999999744677776789999999999999999998756788875017887524763277873-699-85
Q ss_pred CCCHHHCCCCCCCCCCCCCCCCCC----------CCCCCCCCCCCCCCCCCCCCCCCCCCCEE-ECCCCCCCEEECCCCC
Q ss_conf 210001013454322245665321----------12333221001233444445665432001-1156652000002564
Q gi|254780523|r 162 FDQMLQGFLEENSKSLLAGQHLEV----------SSMNAQQMTDFIKQLEDKFSDDEYWANNW-SNASDHNIKYRIKDTE 230 (357)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 230 (357)
T Consensus 159 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (371)
T PRK06819 159 LQKIDSKSLGLGSYSVSGVSGALTSLTDTSVTGVTTTTALDFSDISTFAAGATVHGIGDVGTDGAYADGYVVRYFTTDGK 238 (371)
T ss_pred ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCC
T ss_conf 04344432245543335655542110233443322221111222100001100233221000012245520110123443
Q ss_pred CEEEE---EECCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 10223---203531011233333210023344555113566777778999999999999999866899999999998999
Q gi|254780523|r 231 GIDVS---ANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISEKNINEERVFLQN 307 (357)
Q Consensus 231 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~i~~~~a~lGa~~~~l~~~~~~l~~ 307 (357)
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~al~~iD~Ai~~v~~~Ra~lGA~qNrle~~~~nl~~ 318 (371)
T PRK06819 239 QYKGEVDATNGKVTFADDANGDPIDDATALEAAAQFSPAGKATASPLETLDDALKQVDGLRSSLGAVQNRFESTVTNLNN 318 (371)
T ss_pred CCCCCCCCCCCCEEEECCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 10000123445300002234420000010134332001577899899999999999999999872999999999998999
Q ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 99999986433327888999999999999999999999997368
Q gi|254780523|r 308 KNNIIDTYISKSIGVEQHTAHAQLSTLINKIEMSYMITTKLQKL 351 (357)
Q Consensus 308 ~~~~l~~~~s~l~daD~ae~~t~l~~~q~~~qas~~~~a~i~~~ 351 (357)
T Consensus 319 ~~~nl~aa~s~I~DaD~A~E~t~l~k~qil~Qa~~amLaqANq~ 362 (371)
T PRK06819 319 TVTNLTSARSRIEDADYATEVSNMSRAQILQQAGTSVLAQANQV 362 (371)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 99999997532773039999999999999999999999997707