HHsearch alignment of GI: 254780523 and MMDB domain: 2zbi_A_1-113_232-292
>2zbi_A (A:1-113,A:232-292) Flagellin homolog; flagellum, structural protein; 2.00A {Sphingomonas SP}
Probab=99.96 E-value=1.6e-27 Score=170.04 Aligned_cols=168 Identities=12% Similarity=0.105 Sum_probs=141.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH-HCCCC
Q ss_conf 99999999999999999999999998888999999999999851378889889999999998656777777652-00243
Q gi|254780523|r 57 QEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFVTFANM-TDEGQ 135 (357)
Q Consensus 57 ~~~~~l~~~~~n~~~a~~~l~~~e~~L~~i~~~l~~~~~~~v~a~n~t~~~~d~~~~a~e~~~~~~~l~~~aN~-~~~g~ 135 (357)
.++.++++|.+|+..+.+||+++|++|.++.++|+|+|+++++++||+++++||.+++.|+.+++++|.+++|+ .++|.
T Consensus 2 sqi~~l~q~~rN~~da~s~lqtAe~aL~~i~~iLqrireLavQAaNgt~s~~Dr~ai~~Ei~qL~~eI~~ian~T~fnG~ 81 (174)
T 2zbi_A 2 AQIKGLTQAQRNANDGISLAQTAEGALGEISNNLQRIRELAVQASNGTNTQTDRDALQAEVTQLQSEIQRVAEQTSFNGQ 81 (174)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHHHHHCEETTE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 05666999998799999999999999999999999999999987257999999999999999999999999985223276
Q ss_pred EEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
Q ss_conf 04105665443212233333222222210001013454322245665321123332210012334444456654320011
Q gi|254780523|r 136 YLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENSKSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWS 215 (357)
Q Consensus 136 ~~f~G~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (357)
|+|.|.....+||.....+........
T Consensus 82 ~Lf~Gs~~~~~~~~~~~~~~~~~~~~~----------------------------------------------------- 108 (174)
T 2zbi_A 82 KLLDGSFNGVQFQIGANAGETIGVSKI----------------------------------------------------- 108 (174)
T ss_dssp ESSBSCCCEEEEECSSSTTCEEEEECC-----------------------------------------------------
T ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHC-----------------------------------------------------
T ss_conf 644332100011100000023322101-----------------------------------------------------
Q ss_pred CCCCCCCEEECCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 15665200000256410223203531011233333210023344555113566777778999999999999999866899
Q gi|254780523|r 216 NASDHNIKYRIKDTEGIDVSANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGISE 295 (357)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~i~~~~a~lGa~~ 295 (357)
.....+.........++..||.++..|...|+.+|+.|
T Consensus 109 ------------------------------------------~~~~~~v~t~~~a~~ai~~id~ai~~v~~~r~~lGa~q 146 (174)
T 2zbi_A 109 ------------------------------------------XNAQTTVSSFTNAQQTITQIDNALKDINTARADLGAVQ 146 (174)
T ss_dssp ------------------------------------------CBCSTCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ------------------------------------------CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf ------------------------------------------34222301177799999999999999999999875799
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999998999999999864333
Q gi|254780523|r 296 KNINEERVFLQNKNNIIDTYISKS 319 (357)
Q Consensus 296 ~~l~~~~~~l~~~~~~l~~~~s~l 319 (357)
||||.....+....++++...|.-
T Consensus 147 nrl~~t~~nl~~~~~n~~aa~S~~ 170 (174)
T 2zbi_A 147 NRFTSTVANLQSXTENLSSALEHH 170 (174)
T ss_dssp HHHHHHHC----------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999999998630