PSIBLAST alignment of GI: 254780523 and protein with PDB id: 1io1

>gi|13786773|pdb|1IO1|A Chain A, Crystal Structure Of F41 Fragment Of Flagellin Length = 398
 Score = 62.0 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 21/247 (8%), Positives = 61/247 (24%), Gaps = 1/247 (0%)

Query: 55  WEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINA 114
           +      + +   + +       T++  L+ +   +Q +    V         +      
Sbjct: 1   FTANIKGLTQASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQ 60

Query: 115 GMLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENS 174
             +          +  T          +++     G    +++         Q    +  
Sbjct: 61  AEITQRLNEIDRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTL 120

Query: 175 KSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDV 234
                 +  + ++         I      F              D ++K+          
Sbjct: 121 NVQQKYKVSDTAATVTGYADTTIALDNSTFKASATGLGGTDQKIDGDLKFDDTTG-KYYA 179

Query: 235 SANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGIS 294
              V     +D  +   +        L  GA + LT  + +T  + +  +    A L  +
Sbjct: 180 KVTVTGGTGKDGYYEVSVDKTNGEVTLAGGATSPLTGGLPATATEDVKNVQVANADLTEA 239

Query: 295 EKNINEE 301
           +  +   
Sbjct: 240 KAALTAA 246