PSIBLAST alignment of GI: 254780523 and protein with PDB id: 1io1
>gi|13786773|pdb|1IO1|A Chain A, Crystal Structure Of F41 Fragment Of Flagellin Length = 398
Score = 62.0 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 21/247 (8%), Positives = 61/247 (24%), Gaps = 1/247 (0%)
Query: 55 WEQEKNHIAERLHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINA 114
+ + + + + T++ L+ + +Q + V +
Sbjct: 1 FTANIKGLTQASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQ 60
Query: 115 GMLRDSYESFVTFANMTDEGQYLFSGINSSEKPLNGYFTKDSLAKKSFDQMLQGFLEENS 174
+ + T +++ G +++ Q +
Sbjct: 61 AEITQRLNEIDRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTL 120
Query: 175 KSLLAGQHLEVSSMNAQQMTDFIKQLEDKFSDDEYWANNWSNASDHNIKYRIKDTEGIDV 234
+ + ++ I F D ++K+
Sbjct: 121 NVQQKYKVSDTAATVTGYADTTIALDNSTFKASATGLGGTDQKIDGDLKFDDTTG-KYYA 179
Query: 235 SANVNMRGIRDIMFVAVIGTEFLSKNLTDGARNVLTKKMLSTVQQGLSGIIEQRAVLGIS 294
V +D + + L GA + LT + +T + + + A L +
Sbjct: 180 KVTVTGGTGKDGYYEVSVDKTNGEVTLAGGATSPLTGGLPATATEDVKNVQVANADLTEA 239
Query: 295 EKNINEE 301
+ +
Sbjct: 240 KAALTAA 246