RPSBLAST alignment for GI: 254780523 and conserved domain: pfam00669

>gnl|CDD|144315 pfam00669, Flagellin_N, Bacterial flagellin N-terminal helical region. Flagellins polymerize to form bacterial flagella. This family includes flagellins and hook associated protein 3. Structurally this family forms an extended helix that interacts with pfam00700. Length = 139

 Score = 43.1 bits (102), Expect = 1e-04
 Identities = 33/143 (23%), Positives = 57/143 (39%), Gaps = 9/143 (6%)

Query: 6   ISTSSIFERMNILTKELNKDSVKLHEEMVTGQSSDYGLQLGARVTSILEWEQEKNHIAER 65
           IST+++             +  K  EE+ TG   D  L LGA     +    +   +++ 
Sbjct: 1   ISTNALALAARRTLNRNQAELQKAQEELSTGLRIDSALDLGAGTAISVSLRSQIRGLSQA 60

Query: 66  LHSNSLVTKRLSTSQAHLSSMQKIVQDMVGPLVILLEGKTDNNKFPINAGMLRDSYESFV 125
           + +N+L   RL T+Q  LS +  I+Q +      L     +     I+    +   +   
Sbjct: 61  VRNNNLGISRLQTAQGALSEVTDILQRLRE----LAVQAANGGNSDIDRASAQAEIQQLT 116

Query: 126 TFANMTDE-----GQYLFSGINS 143
           +  N         G+YLFSG N+
Sbjct: 117 SELNNIANTTSFNGEYLFSGTNT 139