HHsearch alignment for GI: 254780524 and conserved domain: COG1344

>COG1344 FlgL Flagellin and related hook-associated proteins [Cell motility and secretion].

Probab=96.37  E-value=0.056  Score=29.10  Aligned_cols=71  Identities=14%  Similarity=0.086  Sum_probs=53.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             87664211123223456799999998876628888999999999999999999999999999999987409
Q gi|254780524|r  410 WLEKNRSDSHDLHMKSQVVFNHISESYSNTVGVNLQEELSFLIKVEQSYNISNKLIMFTDKMLQTLLEGVK  480 (480)
Q Consensus       410 ~~~t~~sg~~~~~~~~~~~~g~i~~~~lE~SNVDL~eE~tnLI~~QraYqANakvItT~Demlq~Lin~~R  480 (480)
T Consensus       290 ~lGa~qnrl~~~~~~l~~~~~nl~~~~s~i~D~D~aee~t~l~~~q~~~Qas~~~laqan~~s~~~l~ll~  360 (360)
T COG1344         290 ELGAVQNRLESAINNLSNQSDNLTAAESRIVDVDMAEESTELTKLQILQQASLQALAQANQLSLLVLSLLR  360 (360)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             87389999999998898899999998864007769999999999999999999999999860288897359