HHsearch alignment for GI: 254780524 and conserved domain: COG1815
>COG1815 FlgB Flagellar basal body protein [Cell motility and secretion].
Probab=98.33 E-value=3.1e-07 Score=61.54 Aligned_cols=46 Identities=28% Similarity=0.258 Sum_probs=42.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEC
Q ss_conf 9135889999999999999867874420257899812679998604
Q gi|254780524|r 1 MSLLAVFNKAQNICNNASQQFASIVRNIENADNKNYVRRDTMTTIS 46 (480)
Q Consensus 1 Msl~~sl~~~~SGL~a~q~~ldvisnNIANvnT~Gyk~~~~~f~~~ 46 (480)
T Consensus 2 ~~~~~~~~l~~~al~~~~~Rq~via~NIANadTP~yKa~dv~Fe~~ 47 (133)
T COG1815 2 MSFDRAFGLLQKALDVRSLRQEVIANNIANADTPGYKAKDVDFESV 47 (133)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH
T ss_conf 6478999999999889999999998531027999987444758999