HHsearch alignment for GI: 254780524 and conserved domain: COG4787
>COG4787 FlgF Flagellar basal body rod protein [Cell motility and secretion].
Probab=97.99 E-value=5.9e-06 Score=53.60 Aligned_cols=50 Identities=16% Similarity=0.217 Sum_probs=44.2
Q ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 99998876628888999999999999999999999999999999987409
Q gi|254780524|r 431 HISESYSNTVGVNLQEELSFLIKVEQSYNISNKLIMFTDKMLQTLLEGVK 480 (480)
Q Consensus 431 ~i~~~~lE~SNVDL~eE~tnLI~~QraYqANakvItT~Demlq~Lin~~R 480 (480)
T Consensus 200 rV~sG~LE~SNVnav~~Mt~mI~~aRqfEmqmKmist~d~na~~anqLl~ 249 (251)
T COG4787 200 RVMSGALEGSNVNAVEEMTDMISLARQFEMQMKMISTADDNAGAANQLLR 249 (251)
T ss_pred EEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_conf 65114134565337999999999888889889887542100688987850