HHsearch alignment for GI: 254780524 and conserved domain: PRK05680
>PRK05680 flgB flagellar basal body rod protein FlgB; Reviewed.
Probab=98.35 E-value=2.9e-07 Score=61.71 Aligned_cols=43 Identities=28% Similarity=0.237 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEE
Q ss_conf 3588999999999999986787442025789981267999860
Q gi|254780524|r 3 LLAVFNKAQNICNNASQQFASIVRNIENADNKNYVRRDTMTTI 45 (480)
Q Consensus 3 l~~sl~~~~SGL~a~q~~ldvisnNIANvnT~Gyk~~~~~f~~ 45 (480)
T Consensus 5 ~~~~~~~l~~aLd~~~~Rq~via~NIANadTPgYKa~dv~Fe~ 47 (137)
T PRK05680 5 FDKALGFQQEALNLRAQRQEVIANNIANADTPGYKARDIDFES 47 (137)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH
T ss_conf 9999999999999999999999860202689998866277999