HHsearch alignment for GI: 254780524 and conserved domain: PRK12619
>PRK12619 flgB flagellar basal body rod protein FlgB; Provisional.
Probab=98.45 E-value=1.1e-07 Score=64.20 Aligned_cols=43 Identities=21% Similarity=0.213 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEE
Q ss_conf 3588999999999999986787442025789981267999860
Q gi|254780524|r 3 LLAVFNKAQNICNNASQQFASIVRNIENADNKNYVRRDTMTTI 45 (480)
Q Consensus 3 l~~sl~~~~SGL~a~q~~ldvisnNIANvnT~Gyk~~~~~f~~ 45 (480)
T Consensus 5 ~d~~~gi~~~aL~~r~~Rq~via~NIANadTPgYKakdv~Fe~ 47 (130)
T PRK12619 5 LDSYFGIHAKALIARDQRASVLANNIANVNTPNFKARDVDFNE 47 (130)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH
T ss_conf 8878667799999999999999862321689998644488999