HHsearch alignment for GI: 254780524 and conserved domain: PRK12623
>PRK12623 flgB flagellar basal body rod protein FlgB; Provisional.
Probab=98.35 E-value=2.6e-07 Score=62.02 Aligned_cols=40 Identities=20% Similarity=0.208 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEE
Q ss_conf 8999999999999986787442025789981267999860
Q gi|254780524|r 6 VFNKAQNICNNASQQFASIVRNIENADNKNYVRRDTMTTI 45 (480)
Q Consensus 6 sl~~~~SGL~a~q~~ldvisnNIANvnT~Gyk~~~~~f~~ 45 (480)
T Consensus 12 tf~ll~~aLd~~~~Rq~vIa~NIANadTPgYKa~dv~Fe~ 51 (131)
T PRK12623 12 TYDLLKKGLDASSYRGKVISNNIANVNTKDYKRHYVTFEE 51 (131)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH
T ss_conf 8999999999999999999860321689998765586999