HHsearch alignment for GI: 254780524 and conserved domain: PRK12628
>PRK12628 flgC flagellar basal body rod protein FlgC; Provisional.
Probab=98.95 E-value=1.1e-09 Score=76.62 Aligned_cols=43 Identities=26% Similarity=0.421 Sum_probs=40.3
Q ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 8766288889999999999999999999999999999999874
Q gi|254780524|r 436 YSNTVGVNLQEELSFLIKVEQSYNISNKLIMFTDKMLQTLLEG 478 (480)
Q Consensus 436 ~lE~SNVDL~eE~tnLI~~QraYqANakvItT~Demlq~Lin~ 478 (480)
T Consensus 96 yV~~pnVn~~~EMvdm~~AsRsYEANv~v~~~aK~M~~~aL~I 138 (140)
T PRK12628 96 FVYTSNINYVEEMANIISASRSYQMNIELLNTTKQLMQRTLQL 138 (140)
T ss_pred CEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 6734898889999999999999999999999999999999861