HHsearch alignment for GI: 254780524 and conserved domain: PRK12628
>PRK12628 flgC flagellar basal body rod protein FlgC; Provisional.
Probab=98.75 E-value=1.2e-08 Score=70.22 Aligned_cols=45 Identities=22% Similarity=0.310 Sum_probs=43.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC------CEEEEEEEEE
Q ss_conf 91358899999999999998678744202578998------1267999860
Q gi|254780524|r 1 MSLLAVFNKAQNICNNASQQFASIVRNIENADNKN------YVRRDTMTTI 45 (480)
Q Consensus 1 Msl~~sl~~~~SGL~a~q~~ldvisnNIANvnT~G------yk~~~~~f~~ 45 (480)
T Consensus 1 M~l~~~~~Ia~sgm~Aqr~Rl~viasNiANa~t~~~~~~~~Y~~k~~vf~~ 51 (140)
T PRK12628 1 MSLNAIFDIAASAMTAETVRLTTSAGNMSNANVEAGSPDEVYQAKYPVFKS 51 (140)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCHHHH
T ss_conf 960778889999999999999999998863688888999733531301344