HHsearch alignment for GI: 254780524 and conserved domain: PRK12630
>PRK12630 flgC flagellar basal body rod protein FlgC; Provisional.
Probab=98.92 E-value=1.3e-09 Score=76.24 Aligned_cols=45 Identities=22% Similarity=0.275 Sum_probs=41.8
Q ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 876628888999999999999999999999999999999987409
Q gi|254780524|r 436 YSNTVGVNLQEELSFLIKVEQSYNISNKLIMFTDKMLQTLLEGVK 480 (480)
Q Consensus 436 ~lE~SNVDL~eE~tnLI~~QraYqANakvItT~Demlq~Lin~~R 480 (480)
T Consensus 99 yV~~PnVd~~~EMvdm~~AsRsYEANv~v~~~aK~m~~~tL~igk 143 (143)
T PRK12630 99 YVSMPNVNVLNEMADMMASTRSYEANVTAMNAEKSMFSKALEIGK 143 (143)
T ss_pred CEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 884689888999999999999999999999999999999998559