HHsearch alignment for GI: 254780524 and conserved domain: PRK12631
>PRK12631 flgC flagellar basal body rod protein FlgC; Provisional.
Probab=98.96 E-value=1.1e-09 Score=76.60 Aligned_cols=45 Identities=27% Similarity=0.340 Sum_probs=41.7
Q ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 876628888999999999999999999999999999999987409
Q gi|254780524|r 436 YSNTVGVNLQEELSFLIKVEQSYNISNKLIMFTDKMLQTLLEGVK 480 (480)
Q Consensus 436 ~lE~SNVDL~eE~tnLI~~QraYqANakvItT~Demlq~Lin~~R 480 (480)
T Consensus 94 yV~~pNVd~~~EMvdm~~A~RsYeANv~~~~~ak~m~~~aL~Igk 138 (138)
T PRK12631 94 FIYKPNVNVMEEMADMISASRSYQMNVQVAEAAKSMLQQTLRMGK 138 (138)
T ss_pred CEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 884489888999999999999999999999999999999997459