HHsearch alignment for GI: 254780524 and conserved domain: PRK12642
>PRK12642 flgF flagellar basal body rod protein FlgF; Reviewed.
Probab=99.95 E-value=1.8e-28 Score=192.60 Aligned_cols=48 Identities=17% Similarity=0.320 Sum_probs=45.5
Q ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999887662888899999999999999999999999999999998740
Q gi|254780524|r 432 ISESYSNTVGVNLQEELSFLIKVEQSYNISNKLIMFTDKMLQTLLEGV 479 (480)
Q Consensus 432 i~~~~lE~SNVDL~eE~tnLI~~QraYqANakvItT~Demlq~Lin~~ 479 (480)
T Consensus 190 v~qG~LE~SNVd~~~EM~~lI~~qRafe~~~k~i~~~D~~l~~ai~~l 237 (241)
T PRK12642 190 VVQGYLEGSNVNAMTEMTRLISVSRAFESVSSLMRDSESSVSEAIKTL 237 (241)
T ss_pred EECCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 775741033062999999999999999999999999999999999987