HHsearch alignment for GI: 254780524 and conserved domain: PRK12782
>PRK12782 flgC flagellar basal body rod protein FlgC; Reviewed.
Probab=98.84 E-value=5.2e-09 Score=72.45 Aligned_cols=46 Identities=20% Similarity=0.227 Sum_probs=42.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC-------CEEEEEEEEEC
Q ss_conf 91358899999999999998678744202578998-------12679998604
Q gi|254780524|r 1 MSLLAVFNKAQNICNNASQQFASIVRNIENADNKN-------YVRRDTMTTIS 46 (480)
Q Consensus 1 Msl~~sl~~~~SGL~a~q~~ldvisnNIANvnT~G-------yk~~~~~f~~~ 46 (480)
T Consensus 3 ~~L~~~~~Ia~sgm~Aq~~Rl~~iAsNlANa~st~~~~~~~py~~k~v~f~~~ 55 (138)
T PRK12782 3 DPLQASLRIASSGLEAQSTRLRVVSENLANAQSTGRTPGADPYQRKTVTFRAE 55 (138)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEHH
T ss_conf 07899999999999999999999998774246678798887640132234131