HHsearch alignment for GI: 254780524 and conserved domain: TIGR01395

>TIGR01395 FlgC flagellar basal-body rod protein FlgC; InterPro: IPR006299 These sequences represent FlgC, one of several components of bacterial flagella. FlgC is part of the basal body. ; GO: 0019861 flagellum.

Probab=98.44  E-value=1.2e-07  Score=63.99  Aligned_cols=42  Identities=24%  Similarity=0.410  Sum_probs=39.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC--------CEEEEEEEEE
Q ss_conf             58899999999999998678744202578998--------1267999860
Q gi|254780524|r    4 LAVFNKAQNICNNASQQFASIVRNIENADNKN--------YVRRDTMTTI   45 (480)
Q Consensus         4 ~~sl~~~~SGL~a~q~~ldvisnNIANvnT~G--------yk~~~~~f~~   45 (480)
T Consensus         1 ~~~f~v~asaL~AQ~~Rmnv~ssNlANA~s~~~~q~~g~pyrr~~~vF~~   50 (147)
T TIGR01395         1 LSIFNVSASALSAQRVRMNVVSSNLANADSTRTPQAEGDPYRRRRPVFEA   50 (147)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEE
T ss_conf             95203454467777767766553220333435778888654684015876