>TIGR02488 flgG_G_neg flagellar basal-body rod protein FlgG; InterPro: IPR012834 This family consists of the FlgG protein of the flagellar apparatus in the proteobacteria and spirochetes. The basal body constitutes a major portion of the flagellar organelle and consists of four rings (L,P,S, and M) mounted on a central rod . The rod consists of about 26 subunits of flgG in the distal portion, and flgB, flgC and flgF are thought to build up the proximal portion of the rod with about 6 subunits each.; GO: 0006928 cell motility, 0043064 flagellum organization and biogenesis, 0009426 flagellin-based flagellum basal body distal rod.

Probab=100.00 E-value=0 Score=303.88 Aligned_cols=234 Identities=16% Similarity=0.126 Sum_probs=170.4 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEC-------------------------CCCEEEEEEEEEHH Q ss_conf 89999999999999867874420257899812679998604-------------------------66069989987206 Q gi|254780524|r 6 VFNKAQNICNNASQQFASIVRNIENADNKNYVRRDTMTTIS-------------------------PENVTVVTQRSENK 60 (480) Q Consensus 6 sl~~~~SGL~a~q~~ldvisnNIANvnT~Gyk~~~~~f~~~-------------------------~~g~~~~~~~~~~~ 60 (480) T Consensus 1 aL~tAaTGM~AQQtn~~VIsNNLANVnT~GFKk~RA~FEDL~YQ~~r~pG~q~~~~~t~~P~G~~~G~GVr~~at~---k 77 (263) T TIGR02488 1 ALWTAATGMNAQQTNMDVISNNLANVNTTGFKKDRAEFEDLLYQTVRQPGAQSSEQQTILPVGVQVGLGVRVVATQ---K 77 (263) T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEECCCCEEECCCEEEEEEE---E T ss_conf 9303365588873578887763311023441212367655747731258888777630034662435850423576---6 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCC---CCCCHHHHHHHCCCCCCCC Q ss_conf 8878887754445567887878998886512677777640113667776687641386---7530011221012222221 Q gi|254780524|r 61 NMFDKVLHAHSSAIGQQRLLQSFEALKEMMSADDHYNNSPTHYISKLRDSLESYSKNL---SEDILGKTVIDNAEEVVQN 137 (480) Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 137 (480) T Consensus 78 ~~~QG~lq~TgN~LDlAI~G~GFFQv~~p------DG~~~YTR~G~F~~n~~G~lVt~~aq~Gy~l~P------------ 139 (263) T TIGR02488 78 LFTQGSLQNTGNDLDLAIEGEGFFQVLLP------DGTTAYTRDGAFKLNAEGQLVTSSAQDGYPLQP------------ 139 (263) T ss_pred EEECCCEECCCCCCCEEEECCCEEEEECC------CCCEEECCCCCCCCCCCCCEECCCCCCCCEECC------------ T ss_conf 64167201058760047864833898669------987610124674608995276443468965366------------ Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEE-EEECCCCE Q ss_conf 00022456566543200011127878875434321011222345667652100121000010100201247-87337711 Q gi|254780524|r 138 FNTSAREVQKIRADADKEIELEISNLRRFLSELTVVNDAIKFKTASKHDAHDFLDQRDVLLQKISEIIGIS-TIVRNNND 216 (480) Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~v~~~n~~~~~~~~~n~~~~~~~~~~~~~~~~~d~~~~~~~~~s~~~~~~-~~~~~~~~ 216 (480) T Consensus 140 --------------------------------------~ItiP~----~A~-------------------~ni~v~~dG~ 158 (263) T TIGR02488 140 --------------------------------------EITIPE----NAT-------------------SNITVGSDGE 158 (263) T ss_pred --------------------------------------EEECCC----CCC-------------------EEEEECCCCE T ss_conf --------------------------------------247188----870-------------------1069867878 Q ss_pred EEEECCCCEEEECCCCCEEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHH Q ss_conf 47870697061034441257630456667664321673365566567766676531110111023313677878876554 Q gi|254780524|r 217 MVVYTSDGTTLFETVPRDINFEKMNSYTVTSESNPIFIDGVVVSSNQGSAVPKGKIKALLQIRDSVVPIFQNQLDEMARV 296 (480) Q Consensus 217 ~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (480) T Consensus 159 VsV~~~~~~~~--------------------------------------------------------------------- 169 (263) T TIGR02488 159 VSVRQGGQTEP--------------------------------------------------------------------- 169 (263) T ss_pred EEEEECCCCCC--------------------------------------------------------------------- T ss_conf 99983789720--------------------------------------------------------------------- Q ss_pred HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH Q ss_conf 31001234557777776543211223456666543322222233333466621000245666655556665443102456 Q gi|254780524|r 297 LIGSFSEKDPIAGNSENVPGLFIADGIKDLDNKLCQGISETICVNPQYRSNPSFLRDGGSVSKKFLWNVKNLAGYPDLIN 376 (480) Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (480) T Consensus 170 -------------------------------------------------------------------------------- 169 (263) T TIGR02488 170 -------------------------------------------------------------------------------- 169 (263) T ss_pred -------------------------------------------------------------------------------- T ss_conf -------------------------------------------------------------------------------- Q ss_pred HHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH Q ss_conf 76642011112333345677652899998777887664211123223456799999998876628888999999999999 Q gi|254780524|r 377 HYCDSFNKNFIFDPVAGINTNVTLLEYARNSIGWLEKNRSDSHDLHMKSQVVFNHISESYSNTVGVNLQEELSFLIKVEQ 456 (480) Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~t~~sg~~~~~~~~~~~~g~i~~~~lE~SNVDL~eE~tnLI~~Qr 456 (480) T Consensus 170 -------~~~GQi~la~FiNPAGL~a~G~NL--f~eT~ASG~p~~g~Pg~~G~G~l~QG~LE~SNV~vV~EmvdmI~aQR 240 (263) T TIGR02488 170 -------QEVGQITLATFINPAGLEAVGENL--FRETPASGDPIVGTPGLDGFGKLKQGFLEASNVNVVQEMVDMITAQR 240 (263) T ss_pred -------EEEECCCEEEEECCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCCEEEEEECCEEECCCCHHHHHHHHHHHHH T ss_conf -------001010112101543477345641--01578868876888888873388816163026744566642336888 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 99999999999999999998740 Q gi|254780524|r 457 SYNISNKLIMFTDKMLQTLLEGV 479 (480) Q Consensus 457 aYqANakvItT~Demlq~Lin~~ 479 (480) T Consensus 241 AYE~NSK~i~asD~Mlq~~~~~~ 263 (263) T TIGR02488 241 AYEMNSKVIQASDQMLQTVSQLL 263 (263) T ss_pred HHHHHHHHHHHHHHHHHHHHHCC T ss_conf 98775388887999999996129

HHsearch alignment for GI: 254780524 and conserved domain: TIGR02488