HHsearch alignment for GI: 254780524 and conserved domain: TIGR02490
>TIGR02490 flgF flagellar basal-body rod protein FlgF; InterPro: IPR012836 Members of this protein are FlgF, one of several homologous flagellar basal-body rod proteins in bacteria. This entry contains proteins only from the proteobacteria, and not in the epsilon subdivision (where the architecture of the related FlgE protein differs substantially from other lineages).; GO: 0006928 cell motility, 0043064 flagellum organization and biogenesis, 0044461 flagellin-based flagellum part.
Probab=99.57 E-value=4.9e-16 Score=115.81 Aligned_cols=50 Identities=14% Similarity=0.208 Sum_probs=44.1
Q ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 99998876628888999999999999999999999999999999987409
Q gi|254780524|r 431 HISESYSNTVGVNLQEELSFLIKVEQSYNISNKLIMFTDKMLQTLLEGVK 480 (480)
Q Consensus 431 ~i~~~~lE~SNVDL~eE~tnLI~~QraYqANakvItT~Demlq~Lin~~R 480 (480)
T Consensus 204 ~v~~g~LEgSNVnav~emv~mI~l~RqFE~Q~Kmm~tA~~na~aan~Ll~ 253 (254)
T TIGR02490 204 RVVSGALEGSNVNAVEEMVSMISLSRQFEMQVKMMKTAEDNAQAANRLLR 253 (254)
T ss_pred EEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 45068554777528899999998753467788999878788999988405