HHsearch alignment for GI: 254780524 and conserved domain: pfam00460
>pfam00460 Flg_bb_rod Flagella basal body rod protein.
Probab=98.71 E-value=6.4e-09 Score=71.89 Aligned_cols=31 Identities=26% Similarity=0.324 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE
Q ss_conf 9999999999999867874420257899812
Q gi|254780524|r 7 FNKAQNICNNASQQFASIVRNIENADNKNYV 37 (480)
Q Consensus 7 l~~~~SGL~a~q~~ldvisnNIANvnT~Gyk 37 (480)
T Consensus 1 l~~a~sal~a~~~~l~vianNiAN~nT~G~k 31 (31)
T pfam00460 1 LYTAVSALNAQQIALDVIANNIANANTTGYK 31 (31)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 9138876508999999998610245576789