BLAST/PSIBLAST alignment of GI: 254780524 and GI: 325291963 at iteration 1
>gi|325291963|ref|YP_004277827.1| flagellar hook-associated protein FlgK [Agrobacterium sp. H13-3] Length = 492
>gi|325059816|gb|ADY63507.1| flagellar hook-associated protein FlgK [Agrobacterium sp. H13-3] Length = 492
Score = 320 bits (819), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 177/495 (35%), Positives = 278/495 (56%), Gaps = 18/495 (3%)
Query: 1 MSLLAVFNKAQNICNNASQQFASIVRNIENADNKNYVRRDTM--TTISPENVTVVTQRSE 58
MSL + N AQ+I NN +Q +NI N N NYV+R + TT+S ++ V R++
Sbjct: 1 MSLTSAMNTAQSIFNNTGKQTDVTSKNIANVGNANYVKRTAILGTTMSGASI-VANGRAQ 59
Query: 59 NKNMFDKVLHAHSSAIGQQRLLQSFEALKEMMSADDHYNNSPTHYISKLRDSLESYSKNL 118
N+++ + + + S A GQ+ +L E +K + +D Y +SP Y+ +L SL+ Y+
Sbjct: 60 NESLLRQTISSASLASGQKTVLTGLEEMKSLFGGND-YESSPATYMKELLKSLDGYASKP 118
Query: 119 SEDILGKTVIDNAEEVVQNFNTSAREVQKIRADADKEIELEISNLRRFLSELTVVNDAIK 178
S+ L T + +A +V + N ++ E+Q +R ADKE+ L++ L L++ N+ +K
Sbjct: 119 SDSALAATAVTSAVDVANSLNKASSELQAMRLRADKEMSLQVDKLNGLLAKFEEANNEVK 178
Query: 179 FKTASKHDAHDFLDQRDVLLQKISEIIGISTIVRNNNDMVVYTSDGTTLFETVPRDINFE 238
+TA + D LDQR+ LL+ IS IIGI+ + R NND+ +YT+DG TLFE VPR + F+
Sbjct: 179 AQTAIGGNPSDALDQRETLLKDISSIIGINVVNRENNDVALYTADGATLFEVVPRKVTFK 238
Query: 239 KMNSYTVTSESNPIFIDGVVVSSNQGS-AVPKGKIKALLQIRDSVVPIFQNQLDEMARVL 297
Y T N I++DGV + ++ GS +G ++ L+Q+RD + P Q+QLDE+AR L
Sbjct: 239 AQPGYDATVTGNAIYVDGVAIKASSGSNTTAEGSLQGLMQVRDDLAPTMQSQLDEIARGL 298
Query: 298 IGSFSEKDPIAGNS--ENVPGLFI----ADGIKDLDNKLCQGISETICVNPQY----RSN 347
I F+EK P + S +PGLF A + G++ +I VNP N
Sbjct: 299 ITMFAEK-PASPTSTLPKMPGLFTYGSPAATTIPASGVVSPGLAASITVNPALIISKGGN 357
Query: 348 PSFLRDGGSVSKKFLWN--VKNLAGYPDLINHYCDSFNKNFIFDPVAGINTNVTLLEYAR 405
P LRDGG ++ N G+ LI+ Y +F+ F I+TN ++L+Y
Sbjct: 358 PELLRDGGINGTAYVINSTTSGGTGFSALIDSYVTAFDAPMNFAASTRIDTNTSILKYGT 417
Query: 406 NSIGWLEKNRSDSHDLHMKSQVVFNHISESYSNTVGVNLQEELSFLIKVEQSYNISNKLI 465
NS+GWLE+ RS + + ++ + SYSN V+L EELS L+ +EQSY + KL+
Sbjct: 418 NSVGWLEQERSGATSANEAKSALYERSATSYSNNTAVSLDEELSLLMDIEQSYKAATKLV 477
Query: 466 MFTDKMLQTLLEGVK 480
D ML++L++ V+
Sbjct: 478 TTIDDMLKSLMDMVR 492