BLAST/PSIBLAST alignment of GI: 254780524 and GI: 86356331 at iteration 1
>gi|86356331|ref|YP_468223.1| flagellar hook-associated protein FlgK [Rhizobium etli CFN 42] Length = 495
>gi|86280433|gb|ABC89496.1| flagellar hook-associated protein [Rhizobium etli CFN 42] Length = 495
 Score =  321 bits (823), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 184/494 (37%), Positives = 279/494 (56%), Gaps = 19/494 (3%)

Query: 1   MSLLAVFNKAQNICNNASQQFASIVRNIENADNKNYVRRDTMTTISPENVTVVT-QRSEN 59
           MSL +  N AQNI NN   Q + +  NI NA NK+YVRR  M T S     VV   R++ 
Sbjct: 1   MSLTSALNTAQNIFNNTGTQSSVVSNNISNAGNKDYVRRQAMLTTSLNGAQVVKIDRAQE 60

Query: 60  KNMFDKVLHAHSSAIGQQRLLQSFEALKEMMSADDHYNNSPTHYISKLRDSLESYSKNLS 119
             +  + L + S    QQ LL   E LK +M  +D Y  SP+ Y+   +  L+++  +  
Sbjct: 61  DALLRQYLKSSSQDSAQQTLLSGLEDLKSIMGGND-YETSPSTYLGVFQQKLQAFRTSPG 119

Query: 120 EDILGKTVIDNAEEVVQNFNTSAREVQKIRADADKEIELEISNLRRFLSELTVVNDAIKF 179
             +  +  I  A++V  + N +++ VQ +RA+ADKEI   +  L   LSE    N+A+K 
Sbjct: 120 STVAAQGAITAAQDVANSLNNASQSVQDVRANADKEIATAVDTLNTLLSEFEKANNAVKT 179

Query: 180 KTASKHDAHDFLDQRDVLLQKISEIIGISTIVRNNNDMVVYTSDGTTLFETVPRDINFEK 239
            TA+  D    LD+R+ +L++IS+I+G+S   R+NNDMV+ T DGT LFET+PR + F+ 
Sbjct: 180 ATATGADTSGALDEREKVLKQISQIVGVSATTRDNNDMVLSTPDGTILFETIPRKVTFKS 239

Query: 240 MNSYTVTSESNPIFIDGVVVSSNQGSAVP-KGKIKALLQIRDSVVPIFQNQLDEMARVLI 298
            + YT T+  N ++IDGV +   +GS    +G +++LLQIRD + P FQ QLDE AR L+
Sbjct: 240 QDIYTATTVGNSVYIDGVALPLGKGSTTTGQGSLQSLLQIRDEIAPNFQKQLDETARGLV 299

Query: 299 GSFSEKDPIAGNSENVPGLFI-ADGIKDLDNKLCQGISETICVNPQY----RSNPSFLRD 353
             F E++  AG    VPGLF  + G  D       G++ TI V+ +       +P  LRD
Sbjct: 300 SLFKEQN-TAGPPAYVPGLFTWSGGTVDTGATAVAGMASTITVSTRVITSQGGDPMRLRD 358

Query: 354 GGSVSKKFLWNVKNLAGYPDLINHYCDSFNKNFIFDPVA----------GINTNVTLLEY 403
           GG  +   + N   ++GY   ++    +   +  FDP A          GI++NV+++EY
Sbjct: 359 GGVNAAGVVLNTSGVSGYTAELDRLYTAMTSDMDFDPAAGAPVGFDATTGIDSNVSIMEY 418

Query: 404 ARNSIGWLEKNRSDSHDLHMKSQVVFNHISESYSNTVGVNLQEELSFLIKVEQSYNISNK 463
           A NS+GWLE+ RS++      +    +   E+YSN  GVNL EEL+ L+ +EQSY  + K
Sbjct: 419 ATNSLGWLEQYRSNATTAAENTAAALSRSDEAYSNETGVNLDEELTLLLDIEQSYKAATK 478

Query: 464 LIMFTDKMLQTLLE 477
           ++   D+ML++LL+
Sbjct: 479 ILNAVDEMLKSLLD 492