RPSBLAST alignment for GI: 254780524 and conserved domain: COG1256

>gnl|CDD|31448 COG1256, FlgK, Flagellar hook-associated protein [Cell motility and secretion]. Length = 552
 Score =  170 bits (432), Expect = 7e-43
 Identities = 116/555 (20%), Positives = 214/555 (38%), Gaps = 78/555 (14%)

Query: 1   MSLLAVFNKAQNICNNASQQFASIVRNIENADNKNYVRRDT-MTTISPEN---------V 50
           MSL ++ N A +  N A         NI NA+   Y R+    TT  P           V
Sbjct: 1   MSLFSLLNTALSGLNAAQAALDVTGHNISNANTPGYSRQRVIQTTNIPYLGGGLNVGTGV 60

Query: 51  TVVT-QRSENKNMFDKVLHAHSSAIGQQRLLQSFEALKEMMSADDHYNNSPTHYISKLRD 109
            VV+ QR  ++ + ++  +A+S +            L+ ++S      +S +  ++   +
Sbjct: 61  NVVSIQRLRDEFLTNQYRNANSQSSYLDTRASQLSQLESLLSEPS--ESSLSTLLNDFFN 118

Query: 110 SLESYSKNLSEDILGKTVIDNAEEVVQNFNTSAREVQKIRADADKEIELEISNLRRFLSE 169
           SL+  + N S+    + V+  A+ +V   N +  ++  +R D + EI   +  +   L +
Sbjct: 119 SLQELASNPSDTAARQAVLSKAQTLVNQINNTYEQLTDLRKDINAEIAATVDEVNSLLKQ 178

Query: 170 LTVVNDAIKFKTASKHDAHDFLDQRDVLLQKISEIIGISTIVRNNNDMVVYTSDGTTLFE 229
           +  +N  I+   A+ +D +D LDQRD L+ ++S++IGIS   R + D  + T +GTTL E
Sbjct: 179 IADLNKQIRKVKAAGNDPNDLLDQRDQLVDELSQLIGISVSKREDGDYNLTTGNGTTLVE 238

Query: 230 TVPRDINFEKMNSYTVTSESNPIFIDGVVVSSNQGSA-VPKGKIKALLQIR--------D 280
                + F  +      +  N I++DG    +   +  +  GK+  LL +R        +
Sbjct: 239 GSEAKV-FAPLPGSDDETRGNVIYVDGDDEKAGNITNTLSGGKLGGLLDLRSDELAPTLN 297

Query: 281 SVVPIFQNQLDEMARVLIGSF-------SEKDPIAGNSENVPGLFIADGIK--------- 324
           ++  +  + LDE  +             ++   I G    +        I          
Sbjct: 298 TLGQLALSFLDEFNKGHGAGLDLNGAEGADFFNIEGLPVILTNDKSNGNISSGGFTVSDA 357

Query: 325 --------DLDNKLCQGISETICVNPQYRSN-------PSFLRDGGSVSKKFLWNVKNLA 369
                    +   +  GI+  +  N  ++ +       P+   DGG+             
Sbjct: 358 NKVGATTIPVTGDVVPGIATRLSDNVTFQISPDAANGNPTLTFDGGANFAGGYVVNDAFT 417

Query: 370 GYPDLINHYCDSFNK------------NFIFDPVAGI------------NTNVTLLEYAR 405
           G     +    +                 IFD    +                T  +Y  
Sbjct: 418 GKAASSSLLNLAVLATPSTKVAFAAPDFTIFDNANALALLNLQNNKKLVGGKSTFSDYYA 477

Query: 406 NSIGWLEKNRSDSHDLHMKSQVVFNHISESYSNTVGVNLQEELSFLIKVEQSYNISNKLI 465
             +GW+    S +       + + N ++    +  GVNL EE++ LI+ +Q+Y  S K+I
Sbjct: 478 GLVGWIGIKASTASSESDAKEALLNQLTSERQSISGVNLDEEMANLIQFQQAYQASAKVI 537

Query: 466 MFTDKMLQTLLEGVK 480
              D+ML TLL  V 
Sbjct: 538 QTVDEMLDTLLNIVG 552