HHsearch alignment for GI: 254780525 and conserved domain: COG1815

>COG1815 FlgB Flagellar basal body protein [Cell motility and secretion].
Probab=98.33  E-value=7.6e-07  Score=61.23  Aligned_cols=52  Identities=29%  Similarity=0.429  Sum_probs=46.0

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHCCCC
Q ss_conf             9445889999999999998637887753027786714220024654304777
Q gi|254780525|r    1 MGILGSMKTAMSGMDAQSNRVSAVSDNIANVDTVGYKRTAIAFSSLVFPSTS   52 (421)
Q Consensus         1 MSl~~~l~~a~SGL~A~q~al~vts~NIANanT~GYsRq~~~~~~~~~~~~~   52 (421)
T Consensus         2 ~~~~~~~~l~~~al~~~~~Rq~via~NIANadTP~yKa~dv~Fe~~L~~~~~   53 (133)
T COG1815           2 MSFDRAFGLLQKALDVRSLRQEVIANNIANADTPGYKAKDVDFESVLKKALA   53 (133)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf             6478999999999889999999998531027999987444758999999872