HHsearch alignment for GI: 254780525 and conserved domain: COG1815
>COG1815 FlgB Flagellar basal body protein [Cell motility and secretion].
Probab=98.33 E-value=7.6e-07 Score=61.23 Aligned_cols=52 Identities=29% Similarity=0.429 Sum_probs=46.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHCCCC
Q ss_conf 9445889999999999998637887753027786714220024654304777
Q gi|254780525|r 1 MGILGSMKTAMSGMDAQSNRVSAVSDNIANVDTVGYKRTAIAFSSLVFPSTS 52 (421)
Q Consensus 1 MSl~~~l~~a~SGL~A~q~al~vts~NIANanT~GYsRq~~~~~~~~~~~~~ 52 (421)
T Consensus 2 ~~~~~~~~l~~~al~~~~~Rq~via~NIANadTP~yKa~dv~Fe~~L~~~~~ 53 (133)
T COG1815 2 MSFDRAFGLLQKALDVRSLRQEVIANNIANADTPGYKAKDVDFESVLKKALA 53 (133)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 6478999999999889999999998531027999987444758999999872