HHsearch alignment for GI: 254780525 and conserved domain: PRK12623
>PRK12623 flgB flagellar basal body rod protein FlgB; Provisional.
Probab=98.33 E-value=6.4e-07 Score=61.74 Aligned_cols=44 Identities=36% Similarity=0.500 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHC
Q ss_conf 89999999999998637887753027786714220024654304
Q gi|254780525|r 6 SMKTAMSGMDAQSNRVSAVSDNIANVDTVGYKRTAIAFSSLVFP 49 (421)
Q Consensus 6 ~l~~a~SGL~A~q~al~vts~NIANanT~GYsRq~~~~~~~~~~ 49 (421)
T Consensus 12 tf~ll~~aLd~~~~Rq~vIa~NIANadTPgYKa~dv~Fe~~L~~ 55 (131)
T PRK12623 12 TYDLLKKGLDASSYRGKVISNNIANVNTKDYKRHYVTFEETLKD 55 (131)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH
T ss_conf 89999999999999999998603216899987655869999987