HHsearch alignment for GI: 254780525 and conserved domain: PRK12628
>PRK12628 flgC flagellar basal body rod protein FlgC; Provisional.
Probab=99.06 E-value=3.4e-10 Score=82.59 Aligned_cols=47 Identities=23% Similarity=0.366 Sum_probs=41.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC------CCCCCEEHHHHH
Q ss_conf 94458899999999999986378877530277867------142200246543
Q gi|254780525|r 1 MGILGSMKTAMSGMDAQSNRVSAVSDNIANVDTVG------YKRTAIAFSSLV 47 (421)
Q Consensus 1 MSl~~~l~~a~SGL~A~q~al~vts~NIANanT~G------YsRq~~~~~~~~ 47 (421)
T Consensus 1 M~l~~~~~Ia~sgm~Aqr~Rl~viasNiANa~t~~~~~~~~Y~~k~~vf~~~~ 53 (140)
T PRK12628 1 MSLNAIFDIAASAMTAETVRLTTSAGNMSNANVEAGSPDEVYQAKYPVFKSVQ 53 (140)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCHHHHHH
T ss_conf 96077888999999999999999999886368888899973353130134466