HHsearch alignment for GI: 254780525 and conserved domain: PRK12819
>PRK12819 flgG flagellar basal body rod protein FlgG; Reviewed.
Probab=100.00 E-value=4.6e-31 Score=215.57 Aligned_cols=121 Identities=23% Similarity=0.378 Sum_probs=104.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHC---------CCCCCCCCCCEEEEEEEEEECCCCE
Q ss_conf 5889999999999998637887753027786714220024654304---------7777631220588578863034111
Q gi|254780525|r 4 LGSMKTAMSGMDAQSNRVSAVSDNIANVDTVGYKRTAIAFSSLVFP---------STSNSYVSGGLEISTKDMISEQGSL 74 (421)
Q Consensus 4 ~~~l~~a~SGL~A~q~al~vts~NIANanT~GYsRq~~~~~~~~~~---------~~~~~~~G~GV~v~~i~r~~~~~~~ 74 (421)
T Consensus 1 lrglY~a~sGm~a~q~~ldviaNNlANvnT~GfK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~qG~l 80 (257)
T PRK12819 1 MNGLYIGSMGMMNYMQHINVHSNNVANAQTTGFKAENMTSKVFDVQDTYRRGDGAVTNIGSVDYAVVPAATHVNLVQGNI 80 (257)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCEEEECCCCCC
T ss_conf 92899999999999987889989998777732183523688888665301588766655432341362101540356652
Q ss_pred EECCCHHHHHHC----CCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCH
Q ss_conf 214830221103----66620101798825642011222123672014556201
Q gi|254780525|r 75 MHTASNTDLAIQ----GKGFFIVKGRDNVNCLTRAGDFHINNEGFLENVAGGVL 124 (421)
Q Consensus 75 ~~t~~~~d~a~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 124 (421)
T Consensus 81 ~~Tg~~lDlAi~~~~~g~g~F~v~~~~g~~~yTR~G~F~~d~~G~Lvt~~G~~V 134 (257)
T PRK12819 81 QMTNSDTDFFLDDGPAGTSSFFVTSKNGETFLTRDGSFTLNSDRYLQTSSGAFV 134 (257)
T ss_pred CCCCCCCCCEEEECCCCCCEEEEECCCCCEEEEECCCEEECCCCCEEECCCCCC
T ss_conf 026886320445135678558998389967898666568989987891899983