HHsearch results for GI: 254780525 and protein with PDBid: 1wlg_A

>1wlg_A Flagellar HOOK protein FLGE; EAR-& motif, structural protein; 1.80A {Salmonella typhimurium} SCOP: b.152.1.1 PDB: 2bgy_A 2bgz_A
Probab=99.85  E-value=6.9e-20  Score=143.00  Aligned_cols=298  Identities=22%  Similarity=0.356  Sum_probs=206.5

Q ss_pred             HHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             22110366620101798825642011222123672014556201111101345554323445444444444554543332
Q gi|254780525|r   81 TDLAIQGKGFFIVKGRDNVNCLTRAGDFHINNEGFLENVAGGVLLGYPLKNASAPLIVNSFQGLERINVKHAELSAMPTT  160 (421)
Q Consensus        81 ~d~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (421)
                      ||+|+.++++|......+...++|...|..+.+++|.+..+.+.+++.............  ..................
T Consensus         2 LDlAI~G~GFFvV~~~~g~~~YTRaG~F~~D~~G~LVn~~G~~l~G~~~d~~~~~~~~~~--~~~~i~i~~~~~~~~aTt   79 (299)
T 1wlg_A            2 LDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGMQLTGYPATGTPPTIQQGA--NPAPITIPNTLMAAKSTT   79 (299)
T ss_dssp             EECCCSSSCEEEEECTTCCEEEESCCEEEECTTSCEECTTCCEEEEEECBTTTTBCCTTC--CCEECCCCCCCBCCBCCC
T ss_pred             CCEEECCCCEEEEECCCCCEEEECCCCEEECCCCCEECCCCCEEEEEECCCCCCCCCCCC--CCCCCCCCCCCCCCCCCE
T ss_conf             667876883799876999888834887019899988849999898576368886212577--555421344455776531


Q ss_pred             CEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCC
Q ss_conf             11233102455444444444456776543222103675406887367787621355554204776304444465666644
Q gi|254780525|r  161 TGFISNNLDKNATIITPDKTPKHNGRDAEYTHKSSFAAYDTLGSSVVYDVYYTKTGDKKWEVSIFRQDQSTNNSFPYNVA  240 (421)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (421)
                      .......+......  .............+.+.....++|..|..+.+.+++.+.....|..............     .
T Consensus        80 ~~~~~~NL~a~~~~--~~~~~~~~~~~~t~~~~ts~~vyDs~G~~~~~~~~f~k~~~~~w~~~~~~~~~~~~~~-----~  152 (299)
T 1wlg_A           80 TASMQINLNSTDPV--PSKTPFSVSDADSYNKKGTVTVYDSQGNAHDMNVYFVKTKDNEWAVYTHDSSDPAATA-----P  152 (299)
T ss_dssp             EEEEEEEEETTCCC--CSSCSCCTTCTTSCSEEEEEEEECTTCCEEEEEEEEEEEETTEEEEEEEETTCTTCCC-----C
T ss_pred             EEEEEECCCCCCCC--CCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEEEEEEECCCCEEEEEECCCCCCCCC-----C
T ss_conf             47886125543355--5555556466664011566898747995334358876504651389992378754546-----6


Q ss_pred             CCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE
Q ss_conf             32100122024456445776533212467766554332333331002333343233444332344344554776338998
Q gi|254780525|r  241 PLNTVEVSFDPVTGYLANSSHKAISFNDNTSGIDQQITIDISKTTQLAGGFIPQKSEINGHAPGKPKDFSVSKDGYVDII  320 (421)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  320 (421)
                      ......+.|+...................................++............+...|.+....++..|.+.+.
T Consensus       153 ~~~~~~l~Fd~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tq~~~~~~~~~~~~dG~~~G~l~~~~i~~dG~i~~~  232 (299)
T 1wlg_A          153 TTASTTLKFNENGILESGGTVNITTGTINGATAATFSLSFLNSMQQNTGANNIVATNQNGYKPGDLVSYQINNDGTVVGN  232 (299)
T ss_dssp             CSCSEEEEECTTSBEEECCEEEEECCCBTTBCCCEEEEECTTCEEESSCCCEEEEEEECCBCCBCEEEEEECTTCEEEEE
T ss_pred             CCCEEEEEECCCCCCCCCCCEEECCCCCCCCCCCCCEEEEEEEEECCCCCCEEEEEECCCCCCEEEEEEEECCCEEEEEE
T ss_conf             55305888567762011442000234546654211000000000013674214554038843004310010798089999


Q ss_pred             ECCCCCCCCCCCEECCCCCHHHHHHCCCCEEEECCCCCCEEECCCCCCCCEEEEECCEECCCCCHHH
Q ss_conf             4143211012220012178678774169526632335870213788876114652310004778999
Q gi|254780525|r  321 YDDGTRVPIYRLAIATVPSEDNLKLFDGNTYLPTRDSGDISIGFPGHNQHGEIFSGALETANVDIAS  387 (421)
Q Consensus       321 ~~~~~~~~~~~~~~~~~~n~~~l~~~g~~~~~~~~~sg~~~~~~~~~~~~~~i~~~~le~SgVnlDE  387 (421)
                      +.++.......+.+++|.||.+|.+.|++.|.++..||.+.++.++...+|+|.+++||+|+|||-|
T Consensus       233 ysNG~~~~lgqiala~F~Np~gL~~~g~n~~~~t~~SG~~~~g~~g~~g~G~i~~g~LE~SNVDla~  299 (299)
T 1wlg_A          233 YSNEQEQVLGQIVLANFANNEGLASQGDNVWAATQASGVALLGTAGSGNFGKLTNGALEASNVDLSK  299 (299)
T ss_dssp             ETTSCEEEEEEECEEECSCGGGSEECSTTCEECCTTTCCCEEECTTBTTBCCCSSCEEEEC------
T ss_pred             ECCCCEEEEEEEEEEEECCHHHHHHCCCCEEECCCCCCCCEECCCCCCCCEEEEECCEEHHHCCCCC
T ss_conf             6799478877999996079788330159618765667874324799888233852744223325268