BLAST/PSIBLAST alignment of GI: 254780525 and GI: 116250500 at iteration 1
>gi|116250500|ref|YP_766338.1| flagellar hook protein FlgE [Rhizobium leguminosarum bv. viciae 3841] Length = 433
>gi|115255148|emb|CAK06222.1| flagellar hook protein (agr_c_1012p) [Rhizobium leguminosarum bv. viciae 3841] Length = 433
Score = 350 bits (899), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 200/437 (45%), Positives = 269/437 (61%), Gaps = 20/437 (4%)
Query: 1 MGILGSMKTAMSGMDAQSNRVSAVSDNIANVDTVGYKRTAIAFSSLVFPSTSNSYVSGGL 60
M I GSMKTA+SGM+AQ+NR+S V+DNIANV+T GYK + +FSSLV PS+ +Y SGG+
Sbjct: 1 MSIFGSMKTAVSGMNAQANRLSTVADNIANVNTTGYKAVSTSFSSLVLPSSGGNYNSGGV 60
Query: 61 EISTKDMISEQGSLMHTASNTDLAIQGKGFFIVKGRDNVNCLTRAGDFHINNEGFLENVA 120
+ S + +S+QG + +T S+TDLAI G GFFIV+G D LTRAGDF ++EG L N A
Sbjct: 61 QTSVRQAVSDQGDISYTTSSTDLAISGDGFFIVQGADGTPVLTRAGDFTKDDEGNLVNAA 120
Query: 121 GGVLLGYPLKNASAPLIVNSFQGLERINVKHAELSAMPTTTGFISNNLDKNATIIT--PD 178
G L+GY S ++VN F GL +NV L+A+ +T+G NLD A +++ D
Sbjct: 121 GFQLMGYSYDAGSPAVVVNGFDGLVPVNVNQEGLTAIASTSGVFKGNLDSGANVVSTAAD 180
Query: 179 KTPKHNGRDAEYTHKSSFAAYDTLGSSVVYDVYYTKTG-----------DKKWEVSIFRQ 227
+ ++ T K S AYD+LG+ V+YD Y+TKT WEV+IFR
Sbjct: 181 RPSANSATTTADTKKFSMVAYDSLGNKVMYDFYFTKTSVTTPPPATPATASTWEVAIFRN 240
Query: 228 -DQST--NNSFPYNVAPLNTVEVSFDPVTGYLANSSHKAISFNDNTSGIDQQITIDISKT 284
D +T SFPY+ A + T + FD TG + NS+ A++ D+T+ Q I +D++
Sbjct: 241 ADAATGGTTSFPYSTAAIGTTTLDFD-ATGKITNSTG-AVTI-DDTARTGQMIDMDLTGF 297
Query: 285 TQLAGGFIPQKSEINGHAPGKPKDFSVSKDGYVDIIYDDGTRVPIYRLAIATVPSEDNLK 344
TQL F + NG A KD +V DG V Y+DG+ P+YR+ +A V S D L
Sbjct: 298 TQLGADFAGTGTP-NGQAASPVKDVTVDGDGIVYAKYEDGSTKPLYRIPLANVASPDKLT 356
Query: 345 LFDGNTYLPTRDSGDISIGFPGHNQHGEIFSGALETANVDIASELTELIEAQRNYAVNSK 404
L GN Y SG GFP N G I +GALE +NVD+A ELTE+IE+QR+Y NSK
Sbjct: 357 LMSGNVYSANGQSGVTVTGFPQTNGLGTIKAGALEGSNVDLAGELTEMIESQRSYTANSK 416
Query: 405 VFQTGSDFMDILISLKR 421
VFQTGSD MD+L++LKR
Sbjct: 417 VFQTGSDIMDVLVNLKR 433