BLAST/PSIBLAST alignment of GI: 254780525 and GI: 13472592 at iteration 1
>gi|13472592|ref|NP_104159.1| flagellar hook protein FlgE [Mesorhizobium loti MAFF303099] Length = 418
>gi|14023338|dbj|BAB49945.1| flagellar hook protein; FlgE [Mesorhizobium loti MAFF303099] Length = 418
 Score =  349 bits (895), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 185/422 (43%), Positives = 255/422 (60%), Gaps = 5/422 (1%)

Query: 1   MGILGSMKTAMSGMDAQSNRVSAVSDNIANVDTVGYKRTAIAFSSLVFPSTSNSYVSGGL 60
           M + G M+T +SGM+AQ+NR+S  +DNIAN DT GYKR++  FS+L+ PST  +Y SGG+
Sbjct: 1   MSLYGMMRTGVSGMNAQANRLSTTADNIANSDTTGYKRSSAEFSTLIMPSTGGAYNSGGV 60

Query: 61  EISTKDMISEQGSLMHTASNTDLAIQGKGFFIVKGRDNVNCLTRAGDFHINNEGFLENVA 120
             + +  +S+ G L +T S +DLA+ G GFF+V+       LTRAG F  + +G L N A
Sbjct: 61  TTTIRQAVSDPGVLQYTTSVSDLAVSGDGFFVVQDPSGTPFLTRAGAFVPDAQGRLVNAA 120

Query: 121 GGVLLGYPLKNASAPLIVNSFQGLERINVKHAELSAMPTTTGFISNNLDKNATIITPDKT 180
           G  L+ Y   N +    VN F+GL+ + +    L+A P+T G  S NL   AT +     
Sbjct: 121 GFQLMAYSYANGTPAATVNGFEGLQPVVISDQGLTATPSTLGTYSGNLPAGATPVAAANL 180

Query: 181 PKHNGRDAEYTHKSSFAAYDTLGSSVVYDVYYTKTGDKKWEVSIFRQDQST-NNSFPYNV 239
           P  N   A+YT KSS  AYD LG+  + DVY+T TG   W+V++F Q ++T   SFPY  
Sbjct: 181 PGANASTAQYTSKSSMVAYDNLGNKKLLDVYFTNTGTGTWQVAVFDQSKATPGTSFPYTG 240

Query: 240 APLNTVEVSFDPVTGYLANSSHKAISFNDNTSGIDQQITIDISKTTQLAGGFIPQKSEIN 299
             L T  ++FD  TG L   +  ++SF   T      + +D+SK TQL  GF    +++N
Sbjct: 241 GALGTANLTFDTTTGKL-TGAPTSVSF---TVPGGASLNLDLSKLTQLGTGFTVSDAQVN 296

Query: 300 GHAPGKPKDFSVSKDGYVDIIYDDGTRVPIYRLAIATVPSEDNLKLFDGNTYLPTRDSGD 359
           G+AP       +SKDG +   Y DG+  P+Y++ +A V S D LK   GN Y    DSG 
Sbjct: 297 GNAPSTIDKVQISKDGTIYAQYKDGSTKPLYKIPLADVQSPDQLKALPGNVYAQGTDSGA 356

Query: 360 ISIGFPGHNQHGEIFSGALETANVDIASELTELIEAQRNYAVNSKVFQTGSDFMDILISL 419
           I +GF    + G I SGALE +NVDIA ELT++I AQR+Y  NSKVFQTGSD MD+L++L
Sbjct: 357 IRVGFANEGKAGSIISGALENSNVDIAEELTDMIAAQRSYTANSKVFQTGSDLMDVLVNL 416

Query: 420 KR 421
           KR
Sbjct: 417 KR 418