RPSBLAST alignment for GI: 254780525 and conserved domain: TIGR03506
>gnl|CDD|163298 TIGR03506, FlgEFG_subfam, fagellar hook-basal body proteins. This model encompasses three closely related flagellar proteins usually denoted FlgE, FlgF and FlgG. The names have often been mis-assigned, however. Three equivalog models, TIGR02489, TIGR02490 and TIGR00488, respectively, separate the individual forms into three genome-context consistent groups. The major differences between these genes are architectural, with variable central sections between relatively conserved N- and C-terminal domains. More distantly related are two other flagellar apparatus familis, FlgC (TIGR01395) which consists of little else but the N-and C-terminal domains and FlgK (TIGR02492) with a substantial but different central domain. Length = 231
Score = 127 bits (322), Expect = 4e-30
Identities = 50/123 (40%), Positives = 76/123 (61%), Gaps = 2/123 (1%)
Query: 5 GSMKTAMSGMDAQSNRVSAVSDNIANVDTVGYKRTAIAFSSLVFPSTS-NSYVSGGLEIS 63
++ TA+SG++AQS+ + +++NIANV+T G+KR+ F L+ S S + V GG+ S
Sbjct: 1 MALYTALSGLNAQSSALDVIANNIANVNTTGFKRSRAEFQDLLSQSGSGSGQVGGGVRAS 60
Query: 64 TKDMISEQGSLMHTASNTDLAIQGKGFFIVKGRDNVNCLTRAGDFHINNEGFLENVAGGV 123
QG+L T ++ DLAI G GFF+V+G D TRAG+F ++ +G+L N G
Sbjct: 61 GVAQDFSQGNLQPTGNSLDLAISGDGFFVVQGPDGTA-YTRAGNFQLDADGYLVNPDGYY 119
Query: 124 LLG 126
LL
Sbjct: 120 LLA 122