HHsearch alignment for GI: 254780526 and conserved domain: COG3437
>COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain [Transcription / Signal transduction mechanisms].
Probab=99.79 E-value=1.1e-19 Score=144.41 Aligned_cols=114 Identities=20% Similarity=0.260 Sum_probs=104.1
Q ss_pred CEEEECCCHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHC-CC---CCCEE
Q ss_conf 968970989999999999997898899982858999999828996799990078966217999863101-33---21000
Q gi|254780526|r 1 MFVLIDDRALVKDGYIALFGDDGVSLEGFNSLEFEEWLQSSAREDVSAIEAFLIGKGEKVLELPRIIRA-HS---QVPLI 76 (223)
Q Consensus 1 ~ILiVeDd~~~~~~l~~~L~~~g~~v~~~~~~~~~~~l~~~~~~d~~iid~~l~~~~~~g~~l~~~lr~-~~---~~pII 76 (223)
T Consensus 16 ~vl~vDD~~~~~~~~~~lL~~~~y~v~~ae~g~~a~kl~~~~~~dlvllD~--~mp~mdg~ev~~~lk~~~p~t~~ip~i 93 (360)
T COG3437 16 TVLLVDDEPDNLEALRQLLRMIGYRVIEAENGEEALKLLQEEPPDLVLLDV--RMPEMDGAEVLNKLKAMSPSTRRIPVI 93 (360)
T ss_pred EEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHCCCCCCEEEEEC--CCCCCCHHHHHHHHHHCCCCCCCCCEE
T ss_conf 488965866689999999974264146414750778875116885677642--577765999999987249765653259
Q ss_pred CCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCC
Q ss_conf 0244321000011122201000102333332100000111
Q gi|254780526|r 77 GISDYPSLQTTLDFFDSGVDDVVNKPIHHREILARVAAIY 116 (223)
Q Consensus 77 ~lt~~~~~~~~i~~l~~GAddyl~KP~~~~eL~ari~a~l 116 (223)
T Consensus 94 ~lT~~~d~~~~~~~~~~g~~dyl~KP~~~~~l~~rv~~~~ 133 (360)
T COG3437 94 LLTAYADSEDRQRALEAGADDYLSKPISPKELVARVSSHL 133 (360)
T ss_pred EEEECCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
T ss_conf 9860587699999997247777528898899999999999