HHsearch alignment for GI: 254780526 and conserved domain: PRK09483
>PRK09483 response regulator; Provisional.
Probab=99.93 E-value=2.3e-26 Score=186.59 Aligned_cols=195 Identities=16% Similarity=0.192 Sum_probs=152.2
Q ss_pred EEEECCCHHHHHHHHHHHHHC-CCEEE-EEECHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHC-CCCCCEECC
Q ss_conf 689709899999999999978-98899-982858999999828996799990078966217999863101-332100002
Q gi|254780526|r 2 FVLIDDRALVKDGYIALFGDD-GVSLE-GFNSLEFEEWLQSSAREDVSAIEAFLIGKGEKVLELPRIIRA-HSQVPLIGI 78 (223)
Q Consensus 2 ILiVeDd~~~~~~l~~~L~~~-g~~v~-~~~~~~~~~~l~~~~~~d~~iid~~l~~~~~~g~~l~~~lr~-~~~~pII~l 78 (223)
T Consensus 4 VlIvDDh~l~r~gl~~~L~~~~~~~vv~~a~~~~~~l~~~~~~~pDvvllDl~l--p~~~Gl~~~~~i~~~~p~~~vivl 81 (216)
T PRK09483 4 VLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMNM--PGIGGLEATRKILRSTPDVKIIML 81 (216)
T ss_pred EEEECCCHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHCCCCEEEECCCC--CCCCCHHHHHHHHHHCCCCCEEEE
T ss_conf 999849999999999999748995899998999999999985599999986889--898752377888740899857863
Q ss_pred CCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 44321000011122201000102333332100000111222222211222222222222222222233212421012344
Q gi|254780526|r 79 SDYPSLQTTLDFFDSGVDDVVNKPIHHREILARVAAIYRRLKVSNNRAETGPIRVFSDGRDPEVQGEVFPLPRRERRILE 158 (223)
Q Consensus 79 t~~~~~~~~i~~l~~GAddyl~KP~~~~eL~ari~a~lRr~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~LT~~E~~lL~ 158 (223)
T Consensus 82 s~~~~~~~~~~al~~Ga~gyl~K~~~~~~l~~ai~~v~~G~~~~~~~~~~-~~~~~~~--~~~~~~~~~~LT~RE~eVl~ 158 (216)
T PRK09483 82 TVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVHSGQRYIASDIAQ-QMALSQF--EPATENPFASLSERELQIML 158 (216)
T ss_pred CCCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCHHHHH-HHHHHCC--CCCCCCCCCCCCHHHHHHHH
T ss_conf 05663288999997488789947999999999999998599706989999-9987323--76545654568999999999
Q ss_pred HHHCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEE
Q ss_conf 32112883400899998652876577766136889999998601456777157
Q gi|254780526|r 159 YLMANRGKRVAKTQIFSAIYGLFDEAVEENVVESHISKLRKKLRNKLGFDPVD 211 (223)
Q Consensus 159 ~L~~~~g~~vsr~~l~~~iwg~~~~~~~~~tv~~~I~rLRkKL~~~~~~~~I~ 211 (223)
T Consensus 159 ll~~--G--~snkeIA~~L------~iS~~TV~~h~~~i~~KL~v~~r~el~~ 201 (216)
T PRK09483 159 MITK--G--QKVNEISEQL------NLSPKTVNSYRYRMFSKLNISGDVELTH 201 (216)
T ss_pred HHHC--C--CCHHHHHHHH------CCCHHHHHHHHHHHHHHHCCCCHHHHHH
T ss_conf 9987--9--9999999996------9899999999999999809999999999