HHsearch alignment for GI: 254780526 and conserved domain: PRK09581
>PRK09581 pleD response regulator PleD; Reviewed.
Probab=99.93 E-value=8.8e-26 Score=182.88 Aligned_cols=114 Identities=17% Similarity=0.255 Sum_probs=106.9
Q ss_pred EEEECCCHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHCCC---CCCEECC
Q ss_conf 6897098999999999999789889998285899999982899679999007896621799986310133---2100002
Q gi|254780526|r 2 FVLIDDRALVKDGYIALFGDDGVSLEGFNSLEFEEWLQSSAREDVSAIEAFLIGKGEKVLELPRIIRAHS---QVPLIGI 78 (223)
Q Consensus 2 ILiVeDd~~~~~~l~~~L~~~g~~v~~~~~~~~~~~l~~~~~~d~~iid~~l~~~~~~g~~l~~~lr~~~---~~pII~l 78 (223)
T Consensus 5 ILiVdD~~~~~~~l~~~L~~~~y~v~~a~~G~eAL~~~~~~~PDLILlDi~M--P~mdG~ev~r~Lk~~~~~~~iPVIvl 82 (457)
T PRK09581 5 ILVVDDIPANVKLLEAKLLAEYYTVLTASSGAEAIEICEREQPDIILLDVMM--PGMDGFEVCRRLKSDPATAHIPVVMV 82 (457)
T ss_pred EEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCEEEEECCC--CCCCHHHHHHHHHCCCCCCCCEEEEE
T ss_conf 9999498999999999998789999998999999999971899989992877--99999999999965988899849999
Q ss_pred CCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCC
Q ss_conf 443210000111222010001023333321000001112
Q gi|254780526|r 79 SDYPSLQTTLDFFDSGVDDVVNKPIHHREILARVAAIYR 117 (223)
Q Consensus 79 t~~~~~~~~i~~l~~GAddyl~KP~~~~eL~ari~a~lR 117 (223)
T Consensus 83 Ta~~d~e~~~~al~~GA~DYL~KP~~~~~L~~ri~~l~r 121 (457)
T PRK09581 83 TALDDPSDRVRGLEAGADDFLTKPINDVALFARVKSLTR 121 (457)
T ss_pred ECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHH
T ss_conf 789999999999864887899899998999999999998